Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02517 ATGTGCCTAGCAGACCTGGAATTTGATTATATAAATCCTTATGACTCCTCTTCTCGAATAAATGTGATGGTTTTGCCTGAGTTTGCTACGCAAGCTGCCTTATGCTTCTTCTACCTTGTTACTCAGCATTGGATAATGGCACTCTTCTGCGCTCCTTATCTTTTCTTCAACATTCGATTGTACAGAAAAAGAAGGCATTTGATTGATGTAACTGAGATATTCAACCAGCTCCACTGGGAAAAGAAGCAACGGCTAGTCAAATTCTTCTACCTTGTCTGTACCCTTTTCCTCTCAGTATTTTGGTAA 306 0.3987 MCLADLEFDYINPYDSSSRINVMVLPEFATQAALCFFYLVTQHWIMALFCAPYLFFNIRLYRKRRHLIDVTEIFNQLHWEKKQRLVKFFYLVCTLFLSVFW 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02517 101 Pfam Cornichon protein 1 100 IPR003377 GO:0016192
Vimu7g02517 101 PANTHER CORNICHON-RELATED 1 98 - -
Vimu7g02517 101 SMART Cornichon_2 1 100 IPR003377 GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02517 Vimu-Chr7 21451637 21452483 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02517 K20368 - gmx:100780362 175.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02517 7 21451637 21452483 Vimu7g02517 7 21451637 21452483 ECH
Vimu7g02517 7 21451637 21452483 Vimu7g02517 7 21451637 21452483 PCT