Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02516 ATGGAGTGGCCTGCTTGCACGGACGAATACGAAAAGCTTGTAATACGAATGAGCACTCCCAGGGTTGTTATTGACAATTCCGTGTTCTCTTCAGCTACTCTTGTCAAGGTTGACAGTGCTAGAAGGCATGGTATTTTATTGGATGCTGTACAAGTGCTCATCGATCTGGACCTTTCTATAAAGAAAGCCTATATTTCTGCTGATGGCAAATGGTGTATGGATGTTTTTCATGTCACCGATCAAAATGGAAACAAGATAACGGACGAAAAGGTTTTAAAATATATTGAGCAGTCACTTGGGAACATTCAGTATGGAAGAACCAACAGTTCTAATGGTCTCACTGCGCTGGAATTGACAGGAACTGACCGAGTCGGTCTTTTATCGGAGGTGTTTGCCGTACTGGCTGATCTTCAATGTGATGTGGTTGAGGCAAAGGTTTGGACTCACAATGGCCGTATTGCTTCCTTAATCTATGTAAAAGATTCTAGTTCTGGGTCTACTATTGAGGACTCTCAGAAAATTAAGAAGATTGAATTGCGCTTAAGAAATGTTTTGAAGGGAGACAATGACATTAGAAGTGCAAATATTTCTGTTTCTATGGCTGCGATGCACACTGAAAGAAGGCTACACCAGATGATGTTTACAGACCGTGATTATGAGAGGACTCCCATTCTTGAGGTTACTTCTGATAACCCAGTAGTGACGGTTCAGAATTGGGCAGGAAGAGGCTATTCAGTCGTGAATGTTCAGTGCAAAGATCGAACCAAGCTTTTATTCGATGTTGTATGCAATTTGACAGACATGGAATACGATGTTTTTCATGCAACTATTAACACAAATGATGACAGAGCATACTTGGAGTTTTATATAAGACACAAAGATGGCACTCCAATTAGCTCAGAACCAGAGCGACAACGTGTAATTCAATGCCTAAAAGCTGCTGTAGAGAGAAGGGCATCTGAGGGTGTTCGGCTAGAGTTATGTAAAGAAGACAGGCAGGGGCTTCTGGCAGAAGTAATGAGAACTTTCCGCGAGAATGGGCTCAATGTGACCAGGGCTGAGATATCCACTGTAGGGAATATGGCTACAAATGTATTCTATGTAACGGATGCCATTGGAAATCCAGCTGATTCAAAAATTATTGAATGTGTTAGGCAGAAAATTGGGTTAAGCTATTTAGAAGTGAAGGAATTGCCGTTGGTAAATCATCAGGAGATGCAGAGAGAGGATCAAGCGGTTGGAATTGGTGGGGCAGTGTTGTTTTCCATAGGGAGTCTGGTGAAAAGAAATCTGTATAGTTTGGGATTAATCAAATCCTGTTCCTGA 1326 0.417 MEWPACTDEYEKLVIRMSTPRVVIDNSVFSSATLVKVDSARRHGILLDAVQVLIDLDLSIKKAYISADGKWCMDVFHVTDQNGNKITDEKVLKYIEQSLGNIQYGRTNSSNGLTALELTGTDRVGLLSEVFAVLADLQCDVVEAKVWTHNGRIASLIYVKDSSSGSTIEDSQKIKKIELRLRNVLKGDNDIRSANISVSMAAMHTERRLHQMMFTDRDYERTPILEVTSDNPVVTVQNWAGRGYSVVNVQCKDRTKLLFDVVCNLTDMEYDVFHATINTNDDRAYLEFYIRHKDGTPISSEPERQRVIQCLKAAVERRASEGVRLELCKEDRQGLLAEVMRTFRENGLNVTRAEISTVGNMATNVFYVTDAIGNPADSKIIECVRQKIGLSYLEVKELPLVNHQEMQREDQAVGIGGAVLFSIGSLVKRNLYSLGLIKSCS 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02516 441 ProSiteProfiles ACT domain profile. 115 192 IPR002912 -
Vimu7g02516 441 SUPERFAMILY ACT-like 30 97 IPR045865 -
Vimu7g02516 441 SUPERFAMILY ACT-like 320 385 IPR045865 -
Vimu7g02516 441 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 1 397 IPR040217 -
Vimu7g02516 441 CDD ACT_ACR_4 322 393 - -
Vimu7g02516 441 Gene3D - 113 186 - -
Vimu7g02516 441 ProSiteProfiles ACT domain profile. 324 403 IPR002912 -
Vimu7g02516 441 CDD ACT_ACR_3 244 318 - -
Vimu7g02516 441 CDD ACT_ACR_2 114 187 - -
Vimu7g02516 441 SUPERFAMILY ACT-like 110 172 IPR045865 -
Vimu7g02516 441 SUPERFAMILY ACT-like 244 311 IPR045865 -
Vimu7g02516 441 CDD ACT_ACR_1 32 100 - -
Vimu7g02516 441 Pfam ACT domain 116 168 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02516 Vimu-Chr7 21446121 21448567 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02516 - - gmx:100780903 791.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02516 7 21446121 21448567 Vimu7g02516 7 21446121 21448567 ECH