Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02514 ATGGTAGCCATGAATTTGGCTTGGTTTGCCAAGACAGCCATCACAACAGCCTTTTTAGGCCGTCTCGGGGAGCTCAGCTTAGCAGGTGGAGCTCTCGGCTTCACTTTTGCTAATGTCACTGGCTTCTCTGTTCTCAACGGTATATGCTGTGCCATGGAACCCATATGGCTCCTTCACAAGACCCTTCTCATGACAATCTTATTGTTGTTATTGGTATCGCTTCCTATCACTTTCTTGTGGCTTAATGTTGACAAAATTTTGATTCATTTTGGCCAACAGCAAGACATCTCCATTGTGGCCAGGACCTATGTTTCCTCTCTCATACCCGACTTGTTTGTTGCCTCGCTCTTCTGTCCCTTAAAGGCCTACTTGAGCTCTCAGAGCATAACTCTTCCCACCATGTTTAGTTCGGCTGTGGCACTGGCTTTCCACATACCCGTTAACATAGTGCTCTCAAAGACCATGGGCCTCAGAGGAGTCGCCATGGCGGTTTGGATTACTGATCTTATTGTTGTGATCCTGCTAGCCATTTATGTTTTAATTATTGAGAACAAAAAGGGAAGCACGTGGAAGGAAGGAGGGTGGTGGGATCAGAGCGTTGAGGATTGGATCAGGCTGGTGAAGCTTTGTGGATCATGCTGCCTCAACACGTGCCTTGAATGGTGGTGCTATGAGATCCTGGTTTTGCTTACTGGCCACCTCAAGAATGCTAAGCAAGCCGTGGGAGTTTTGGCCATTGTGCTAAACTTCGACTATTTGCTTTTCTCAGTGATGCTGTCGCTGGCCACATGTGTTTCCACCCGAGTTTCAAATGAGCTTGGTGCTAACCAAGCTGGCCTTGCTTACCGATCAGCTTATGTGTCTCTGACATTGGGTTTTATCTCTGGTTGCATAGGCAGTTTGCTGATGGTGGCTGCCAGGGGAATTTGGGGGCCATTGTTTAGCCATGATAGGGAAATTATAAAGGGAGTAAATAAGACAATGTTGCTGATGGCTGTGGTGGAAGTGTTTAATTTTCCTTTGGCAGTTTGTGGAGGCATAGTTCGAGGAACAGCACGACCTTGGTTGGGCGCATATGCGAATCTAGGTGGATTTTATTTCCTGGCCTTGCCACTTGGTATTGTTTTTGCCTTCAAGCTCCGTCTTGGCCTTGTTGGACTCTTCATTGGACTTCTTGCTGGTATAGTTACCTGCTTGACGTTGTTATTGATATTCATTGCACGGTTAAACTGGGTGGAAGAAGCCGCCAAGGCACAAACACTGACAAGCAACGAGCAGGTTAAAGAACTTCCCAAATATGACGCAGAAACACGAATAGACGCCCGTGAAAAAGTATAA 1338 0.4664 MVAMNLAWFAKTAITTAFLGRLGELSLAGGALGFTFANVTGFSVLNGICCAMEPIWLLHKTLLMTILLLLLVSLPITFLWLNVDKILIHFGQQQDISIVARTYVSSLIPDLFVASLFCPLKAYLSSQSITLPTMFSSAVALAFHIPVNIVLSKTMGLRGVAMAVWITDLIVVILLAIYVLIIENKKGSTWKEGGWWDQSVEDWIRLVKLCGSCCLNTCLEWWCYEILVLLTGHLKNAKQAVGVLAIVLNFDYLLFSVMLSLATCVSTRVSNELGANQAGLAYRSAYVSLTLGFISGCIGSLLMVAARGIWGPLFSHDREIIKGVNKTMLLMAVVEVFNFPLAVCGGIVRGTARPWLGAYANLGGFYFLALPLGIVFAFKLRLGLVGLFIGLLAGIVTCLTLLLIFIARLNWVEEAAKAQTLTSNEQVKELPKYDAETRIDAREKV 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02514 445 Pfam MatE 213 374 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Vimu7g02514 445 Pfam MatE 59 149 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Vimu7g02514 445 CDD MATE_eukaryotic 1 417 IPR045069 GO:0042910|GO:1990961
Vimu7g02514 445 PANTHER MULTIDRUG RESISTANCE PROTEIN 1 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02514 Vimu-Chr7 21432481 21433848 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02514 K03327 - gmx:100804083 762.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02514 7 21432481 21433848 Vimu7g02514 7 21432481 21433848 ECH