Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02505 AATAGCAGGAGAGAGATGAGAGTGATAGTGCCTCTACAAGGGGTTGTTCAAGGCACAGGAGGTCTTTTCTGGGGTTCCGTCATTCCTTGTGCCCTCTTCTACTTTCTTCAACTCTTCTTCAAAACCAAGACACGTCACCACCAACCACCACCTTCCCACAACCATAAGGAGGATTCCACCACCTTCCACCGTACTCTATCTCTCACCGCAAGGCACGCTTCTGCCTCTGCTTACGTCTCCCCTCGCGCCAATTCCATAACCGCTACTAACTCTTCTTTCCATCTTGGTTTCGACAAGGTTGCTGATGATCCCTACCATGAAACTCATAATCCCGATGGAGTTATTCAACTTGCTTTGCACCAAAACACCCTATCTCTTGATTTAATTCAAGATTGGATTCACTGCAACGGAAGCGCTGCTATATTGGGGACACCTCTCACCATTTCCAGGATTGTTCCCTACCAACCTTTCGATGGATTGATGGAGCTCAAAGCGGCTGTGGCTGGTTTCATGTGTCAAGTTTTGGAAAAGCCCATTTTCTTCAACACTTCGCGAATGGTACTGACTGCAGGTGCTTCCTCTGCCATTGAGATTCTGAGCTTCTGCCTAGCAGATAACGGAAATGCATTTCTTGTTCCCACGCCTCTTAGCCCTGGTTTTGACGAGGTTGTAAAATGGCGCACTGGAGCTGAGATAGTACCTGTTCCCTGTCGCAGCGCTGATGACTTCAATTTAAGTATAACTTCACTTGAGAGAACCTTCAATCAAGCAAAGATGCGTGGTCAAAAAGTTCGTGGAATTATAATAACCAACCCCTCAGATCCTGCTGGAAAATTGTTGAATCGGGAAACACTGTTGGATCTTTTGGACTTTGCTAGAGAGAAGAACATTCATATAATCTCCAGTGAAATGTTTGCAGGCTCTTCTTATGGTAATGAAGAATTTGTGAGCATGGCAGAAATAATGGAGACAGAAGATCATGACCGGGACAGAGTTCATATAGTGTTTGATTTATCCAATGAGCTTTCTGTTCCAGGCTTGAAGGCGGGTGCTATCTACTCCTATAATGACGATGTCGTGGCTGCTTCTAGAAAATTGGCAAGGTTCTCCACGGTTTCTGTCCCAACTCAAAGATTGCTTATCTCCATGCTTTCAGATACAAGTTTTATGCAAAAGTTTATTGAGGTTAACAGATTGAGGATGCGGAAAATGTATAATATATTTGTGACAGGGTTAAAGCAGTTGGGGATTGAGTGCACTAGGAGCAGTGGTGGTTTTTGCTGCTGGGCTGACATGAGCAGGTTGATTCGGTCTTACAGTGAAAAGGGGGAGCTTGAGCTGTGGGATAAATTGTTGAATGTTGTCAAGATCAATGTTACCCCGGGTTCTTCATGTCACTGTATTGAACCTGGATGGTTTCGTTTTTGTTTTGCTACATCCACTGAAAAGGATGTTTCTGTAGTGATGGAACGGATCTGGAGAATTTCCGACTCCACAAAGTGA 1503 0.4458 NSRREMRVIVPLQGVVQGTGGLFWGSVIPCALFYFLQLFFKTKTRHHQPPPSHNHKEDSTTFHRTLSLTARHASASAYVSPRANSITATNSSFHLGFDKVADDPYHETHNPDGVIQLALHQNTLSLDLIQDWIHCNGSAAILGTPLTISRIVPYQPFDGLMELKAAVAGFMCQVLEKPIFFNTSRMVLTAGASSAIEILSFCLADNGNAFLVPTPLSPGFDEVVKWRTGAEIVPVPCRSADDFNLSITSLERTFNQAKMRGQKVRGIIITNPSDPAGKLLNRETLLDLLDFAREKNIHIISSEMFAGSSYGNEEFVSMAEIMETEDHDRDRVHIVFDLSNELSVPGLKAGAIYSYNDDVVAASRKLARFSTVSVPTQRLLISMLSDTSFMQKFIEVNRLRMRKMYNIFVTGLKQLGIECTRSSGGFCCWADMSRLIRSYSEKGELELWDKLLNVVKINVTPGSSCHCIEPGWFRFCFATSTEKDVSVVMERIWRISDSTK 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02505 500 Gene3D - 137 386 IPR015421 GO:0003824
Vimu7g02505 500 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 148 164 - -
Vimu7g02505 500 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 117 143 - -
Vimu7g02505 500 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 261 285 - -
Vimu7g02505 500 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 363 386 - -
Vimu7g02505 500 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 185 205 - -
Vimu7g02505 500 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 207 228 - -
Vimu7g02505 500 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 331 355 - -
Vimu7g02505 500 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 297 320 - -
Vimu7g02505 500 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 76 492 - -
Vimu7g02505 500 SUPERFAMILY PLP-dependent transferases 94 495 IPR015424 -
Vimu7g02505 500 Pfam Aminotransferase class I and II 148 492 IPR004839 GO:0009058|GO:0030170
Vimu7g02505 500 CDD AAT_like 154 492 - -
Vimu7g02505 500 Gene3D Aspartate Aminotransferase, domain 1 103 491 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02505 Vimu-Chr7 21368570 21370966 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02505 K14270 - gmx:100783490 856.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02505 7 21368570 21370966 Vimu7g02505 7 21368570 21370966 ECH