Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02504 ATGATGATGACGGAGGAGGAAGACATGGAGATAGAAGAGTCACAGGTGTTTGTTGCTCATGAGATTGATTTGGATTATGAGTTCGACGCAGTTCGATTCTTCGATTTCAGCGTGCAAGAAACTCCTGATCAAGCTCGCCAAGCTCAACTCTGGTTTCAATCCGCCGTCAGCTACCCTCCTTCCCCTTTTGTGGTGAAGCTAGTGGTTAGAGAGGACGAATCAGAGGGTCTGGAATGCGCAACCACCGTTCACGGTGCCAAGCCTAACAATGTTCCGTCGGGGATTGGATTTTCGCGCTCCGTTTTTCACTATGACGGTGGTTCAAAAGGAGGGGATGAGAGCGGGAACATCTCTGCCTTGCTGAGTGGAGTTCCACGGGATGTTAACGGGAAACTGTTACAAGTAACTCCAGGACTGACCTTTAGTAGCAAGACAATCAATGGTAATTTGAGTTCAAAAGTTAAACCTTCTGCCATGAAGGGTTCAACACTAATGAAACCTACTGCTAGTCAGTTGGCTAAGCAAAATCGGCCCCGTCAAATTGTTAGCTCAAGGTTTCATAAAGTACAAGATGGCAACAAAAAAATGAATTTGTCTACGCCTTTTGGCATAGAGTGTCAAGCTGCCAAACGACAGAAATTAGAAGGTGGCAGCTTGCACAAGGTTGGTGATGTGAAGCAGCAAGTTAATTTTGTCCACAAGGCACCTAAGAAGGTTGCAAGTGTTGATCAAAATTATGGACATTCCAAGCTGAAGATTACAATTCCTAGAGAGCCTGACTTAGAAACAGCTCACAGAGCACAAAGGATTAGACCTAAAAATGCTGCAGAGGCAGAAGTTGTGACAGTGGCAGCCCCCAGATTTAAAGCCCGGCCATTAAACAGAAAAATTCTAAATGCTCCTTCGTTACCATTTTCCAAGAGGAGCACACCACGATTGCCTGAATTTCAAGAATTTCATCTGAAGACACAGGAGAGGGCCATGCAGCATACATCTGCGTCTTCATCATCTTCACTTCATTGCAATGATTCAAATAAGGAAATGGACAAACCTACCACTGTTTGGGCTCAAGAAAATAGAATCGGGGATTTGAGAAGGCCATCTGCCATGGGTGCTCCAAAGCATGATGGGTTGGATTTTGCACATAGTTTTAAAGCTCGGCCTCTTAATAAGAAGATTCTTTCAAGTAAAGGAGATATTGGTGTTTTCCGGAATAGAAAGCAGGAAACCACTGTGCCAATGGAATTTAACTTCCATACGGAAAAGAGGATTCAGCATAACCCACCAATTGAACTCTTTAGCAAGATGTCCCTAACATCAGAGGTCCAGTCAAATAATGGATCTCACTTGAAACTGCCTCGGCATTCTAAAGTGTTTAGAGAGGATTCAAAAGAAAATATAGGGAGTTCTTTTCATGGGAATGCAAAGGAAACGCCTTTCATATTTGGAGGAAAGCAAATTCATAGTAGGAGAGAAGGCTGCGACCCTGAACCCGGTACTCTGTTAACTGCGAGGAGGTATGCATAA 1527 0.4394 MMMTEEEDMEIEESQVFVAHEIDLDYEFDAVRFFDFSVQETPDQARQAQLWFQSAVSYPPSPFVVKLVVREDESEGLECATTVHGAKPNNVPSGIGFSRSVFHYDGGSKGGDESGNISALLSGVPRDVNGKLLQVTPGLTFSSKTINGNLSSKVKPSAMKGSTLMKPTASQLAKQNRPRQIVSSRFHKVQDGNKKMNLSTPFGIECQAAKRQKLEGGSLHKVGDVKQQVNFVHKAPKKVASVDQNYGHSKLKITIPREPDLETAHRAQRIRPKNAAEAEVVTVAAPRFKARPLNRKILNAPSLPFSKRSTPRLPEFQEFHLKTQERAMQHTSASSSSSLHCNDSNKEMDKPTTVWAQENRIGDLRRPSAMGAPKHDGLDFAHSFKARPLNKKILSSKGDIGVFRNRKQETTVPMEFNFHTEKRIQHNPPIELFSKMSLTSEVQSNNGSHLKLPRHSKVFREDSKENIGSSFHGNAKETPFIFGGKQIHSRREGCDPEPGTLLTARRYA 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02504 508 MobiDBLite consensus disorder prediction 329 349 - -
Vimu7g02504 508 Pfam Cell cycle regulated microtubule associated protein 251 418 IPR027330 -
Vimu7g02504 508 MobiDBLite consensus disorder prediction 488 508 - -
Vimu7g02504 508 PANTHER TARGETING PROTEIN FOR XKLP2 18 466 IPR009675 GO:0005819|GO:0005874|GO:0032147|GO:0060236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02504 Vimu-Chr7 21359073 21365197 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02504 - - gmx:100806215 820.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02504 7 21359073 21365197 Vimu7g02504 7 21359073 21365197 ECH