Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02500 ATGTCTTCTGATAGCGCAAAGGAAAATATGTCGGTAGTTGATTCATCTGTCACTGAATGGAGGAATGACATTGGAAATTCAGATGATCCAGAGAGCTCCTCTTACAAGTTTAATGAAAACAATAATCCAATTCGGACAGATATAGCGGAACACTCTTATGGTCTGATAGGGCATCCAACAGGAATTGGAGTGGAAAAGTGGAATGATATTAAGTATTTCATCATTAAGAGTTTGAACCGTCAAAATATTGATTTGTCTATTAAGAAAGGAATTTGGGCTACTCAAATTATGAATGAACGGATTCTAGAAGAAGCTTTTCATCATATGTTGCAGAACTCGGGCTGTGTAATCCTTATATTTAGTGTCAACATGAGTGGTTCCTTCCAAGGATACGCACAAATGATGTCCTCCATTGGAAAGGGTAGAGACAATGTTTGGAGTGAGGGAATTGGTAAAAGTAATCCTTGGGGCCGCAGTTTTAAGGTCCAGTGGCTGCGTTTCAATGATTTGCCTTTCCACAAAACTCTACATCTCAAGAATCCGTTGAATGACTATAAGCCTGTCAAAATTAGCAGAGATTGTCAGGAGTTATCTCCAGACATTGGCCTAGCTCTTTGTGAACTTCTTGATGGTAAGAATGATACCAATGACCTACTGACCAGCTCATTAAGGGGTGATTTTTCATTTAAGGGTCGCTATGTGAGTACTCCAAGTTCAATGGGAGACGAAGACTATAAATTTCGTCCACTTCATATGTCATGGTCAATGCCGCTGCCTTATTCTTCCCTGTTTTACCAAAATCAACCCGTAGTAAATGAATTTCGTTCAACAAAGCAGAGATTCAGTGGGACAATGCTTACTGAAACACTGCCTATCACTTCTTCTGCGTCGCCACAACTGTCAGGGATTAAACGTGCTCATTATAGTGGACATATTCCAGAGCTTCAAACAAAGAAGGACGTGTCTTCTCAATTAGATTTTTGGGGTGTGTCTACAGGCTGCCCTTTAGCCGGTAGTACCCTAACTGAGGATGATTTTCTTGACATGTCCTATGAAGAATACCTGGAGGAGGTCCATAGCCGAAGCAAGAAACAGTTACGCACCAGTGTCAGTATTTATATCAACATCATTTTTCTATTTTCTTGTGTATTTTTTTATCTAGACATGGTATCCATTAGTCACAGGAAACCATAA 1194 0.3987 MSSDSAKENMSVVDSSVTEWRNDIGNSDDPESSSYKFNENNNPIRTDIAEHSYGLIGHPTGIGVEKWNDIKYFIIKSLNRQNIDLSIKKGIWATQIMNERILEEAFHHMLQNSGCVILIFSVNMSGSFQGYAQMMSSIGKGRDNVWSEGIGKSNPWGRSFKVQWLRFNDLPFHKTLHLKNPLNDYKPVKISRDCQELSPDIGLALCELLDGKNDTNDLLTSSLRGDFSFKGRYVSTPSSMGDEDYKFRPLHMSWSMPLPYSSLFYQNQPVVNEFRSTKQRFSGTMLTETLPITSSASPQLSGIKRAHYSGHIPELQTKKDVSSQLDFWGVSTGCPLAGSTLTEDDFLDMSYEEYLEEVHSRSKKQLRTSVSIYINIIFLFSCVFFYLDMVSISHRKP 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02500 397 CDD YTH 71 209 IPR007275 GO:0003723
Vimu7g02500 397 ProSiteProfiles YTH domain profile. 70 209 IPR007275 GO:0003723
Vimu7g02500 397 MobiDBLite consensus disorder prediction 1 39 - -
Vimu7g02500 397 Pfam YT521-B-like domain 71 209 IPR007275 GO:0003723
Vimu7g02500 397 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 66 221 IPR045168 -
Vimu7g02500 397 Gene3D ph1033 like domains 63 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02500 Vimu-Chr7 21344134 21346700 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02500 K20100 - gmx:100784130 553.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02500 7 21344134 21346700 Vimu7g02500 7 21344134 21346700 ECH