Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02494 ATGGCATCGTCGTCTTCGCCTACGGACCAACAACAACTCAGAGATGAAGATCGTGAAGAGGACCATCCTCCGTCGCTCTCAGTCAAAGACTGCATTCACAAAACCAAAACGATTCAGTTTCTCGGACGCACCACTCCGATCGTTCTCCAAAACGACAATGGACCATGCCCGCTCCTCGCTATCTGTAATGTTCTTCTGCTAAGAAACAACTTAAATTTGAGTCCAGATATTTCTGAAGTCTCACAGGAGAAATTACTTTCATTGGTCGCTGAACGATTAATTGATTCAAATAGTAATGTGAATAACAAAGATGCAGGCTATGTCGAAAATCAACAACAGAACATTGCTGATGCAATTGATTTGCTTCCTAGGCTTGCTACTGGCATTGATGTAAATATAAAATTTAGAAGAATTGCTGATTTTGAATTCACTCGAGAGTGTGCCATATTTGATCTGTTGGACATCCCTTTGTATCACGGCTGGATTGTTGATCCTCAGGATTATGACACTGCAAATGCAATTGGATCAAAGTCCTATAATGCTCTTATGGGAGAGCTTGTCTCTCTTGAAACACTAAACATGGATGTCCATCATAAAAATGTTGCAGAAGAAGATTGTGTTGACTTTGTGGCTGCAACAACTGCTACTCTTGGAGTTCCTTCTCCCAGTCTTTCAAAAACCAGGTCTTTTGAAGATTCTTCTCAATCTATTTCTGATCAGATACCAAGAAAAGGTGATCTTGAAGAAGAGGCAGAGTTGTTGAGAATCTTGAAACTGTCCGAGGCTGATTCTAAAGCTTCAATAAGTGATCCTGTTACAGTTCACGGTAATGGAGGGGAAATTTCTGCCAGTATGGAAGGAAATATGAGTAAGGAACAGGTTGTAAATATGGATTCTGGAGATAAACTTGTAAGTAGTGCAGGTGCTGGTAACAGTCACTTTCATGATTCAGAGCCTTCTGTGTCTGACAACTTCACTGCTTCTGACAAAGACCTCAACAAACAGATATCTTCTACTTCTACACCGGGAGAGGCAGCTAATTCATCCTTAAAAACTGATACTGTAAGTGACCTTCATCAGTCGACTTATGCGGGAACTGAAGAATCTTCTGTCCAAAACGATGTGATAGAGAAGAACAGCCTTGATGCATTGGTTCAGAATGAGAGTGAAATTATTCCTTCTCCCAGAGAATACTCTGTCTCAGACGTTTCTGGAGGAGATGGAAAAGTCCATGACCAGTCCACTCCTACAACTAAAGATCATGAAGTTGTAGGTGAATCTCAGGGACCTGATGCAACAAAATCATTGCACTTGTCCCCAGGCCATGCAGACTCAGACTCATGTAGCATCAGTTATCAGCAAACTGATGTTTCTGGAGCTTTGACTTCAACTGTTCATGGGAGTGAGCCCATATACGAGGGAGAGGAATGTGTGTTGGACACAAGAAATTTTGAGAATCGTGAACCTGTTTATGAAGGTGAGGTCGTACTTGCAGAACAGGCTGACAAAAGCACCTTAGCTTCTCCTGATCTTAGAGCTAAGGATGAACTAACTCCAGAGCAAGGAGAATTGATCAAAAGTTTCTTGAGGAATAATGCCAGCCAGTTGACATTTTATGGTCTTTTCTGTTTACAAGATGGGCTTAAAGAGCGTGAGCTCTGTGTTTTCTTCCGTAACAATCATTTCAGCACTATGTTCAAGTATGAGGGTGAGCTCTATCTTCTAGCCACTGATCAAGGTTACATTAATCAGCCAGATCTGGTCTGGGAAAAACTGAATGAGGTCAACGGTGATTCATTGTTTATGACCAGTAATTTCAAGGAATTCAAGGTAGAAAATCATGAAAATAGCACATGGGATGAAAACAATGCCGTGACCAGCACTGCTGACTATCTTGCCAGCATCGATAGTGCAACACAGGCAGGCTTAGATATCAATTCTGATCTGCAATTAGCAATAGCCTTGCAACAGCAGGAATTTGAGCAGCAGCCATCACGCCAGAATAATTTACAACAATCATCCAATATTGGTAACTCTAGACTGGTCACAGGACCCCAGGTTGCAAGAAACACTGGAAGACAGGCTTCGTCTGCATCTACATCTCCCAGGCCTGATGGAAAATCCAAAGAAAAATGTATAGTGATGTGA 2148 0.4176 MASSSSPTDQQQLRDEDREEDHPPSLSVKDCIHKTKTIQFLGRTTPIVLQNDNGPCPLLAICNVLLLRNNLNLSPDISEVSQEKLLSLVAERLIDSNSNVNNKDAGYVENQQQNIADAIDLLPRLATGIDVNIKFRRIADFEFTRECAIFDLLDIPLYHGWIVDPQDYDTANAIGSKSYNALMGELVSLETLNMDVHHKNVAEEDCVDFVAATTATLGVPSPSLSKTRSFEDSSQSISDQIPRKGDLEEEAELLRILKLSEADSKASISDPVTVHGNGGEISASMEGNMSKEQVVNMDSGDKLVSSAGAGNSHFHDSEPSVSDNFTASDKDLNKQISSTSTPGEAANSSLKTDTVSDLHQSTYAGTEESSVQNDVIEKNSLDALVQNESEIIPSPREYSVSDVSGGDGKVHDQSTPTTKDHEVVGESQGPDATKSLHLSPGHADSDSCSISYQQTDVSGALTSTVHGSEPIYEGEECVLDTRNFENREPVYEGEVVLAEQADKSTLASPDLRAKDELTPEQGELIKSFLRNNASQLTFYGLFCLQDGLKERELCVFFRNNHFSTMFKYEGELYLLATDQGYINQPDLVWEKLNEVNGDSLFMTSNFKEFKVENHENSTWDENNAVTSTADYLASIDSATQAGLDINSDLQLAIALQQQEFEQQPSRQNNLQQSSNIGNSRLVTGPQVARNTGRQASSASTSPRPDGKSKEKCIVM 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02494 715 MobiDBLite consensus disorder prediction 221 244 - -
Vimu7g02494 715 MobiDBLite consensus disorder prediction 388 449 - -
Vimu7g02494 715 MobiDBLite consensus disorder prediction 11 28 - -
Vimu7g02494 715 MobiDBLite consensus disorder prediction 413 427 - -
Vimu7g02494 715 MobiDBLite consensus disorder prediction 310 356 - -
Vimu7g02494 715 Pfam MINDY deubiquitinase 62 186 IPR033979 GO:0004843|GO:1990380
Vimu7g02494 715 MobiDBLite consensus disorder prediction 660 715 - -
Vimu7g02494 715 MobiDBLite consensus disorder prediction 1 28 - -
Vimu7g02494 715 MobiDBLite consensus disorder prediction 301 356 - -
Vimu7g02494 715 PANTHER NF-E2 INDUCIBLE PROTEIN 11 711 IPR007518 GO:0004843|GO:1990380
Vimu7g02494 715 MobiDBLite consensus disorder prediction 267 286 - -
Vimu7g02494 715 MobiDBLite consensus disorder prediction 660 703 - -
Vimu7g02494 715 MobiDBLite consensus disorder prediction 221 241 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02494 K01309 - gmx:100808340 1130.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02494 7 21304051 21309809 Vimu7g02494 7 21304051 21309809 ECH