Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02490 ATGAAAGGTTCAAAGCGTTTGGCTGTGTCAGAGCCCAACCAGGTCGATACTAACGAAGCACCGATGCAGTTCCGCAATAAAAGAATAATGGAAGGATCCCTCTTTGATGTTCATAGGGCTGAACCATCTCAACAACCAACGGTGACAGCACCACCATTGGATATGAAACGGGCAGAGTCATCACAGCAGCATATTTATACCTTGTTCTGGACTTTTGGTTTGGCTTACCTGGTGGTGGTTGTTATAAAGCGTGTTGTCTTTATAGTGATAACGCATTGGGTTCAAACACAACTAAAGAATCATCCGGATGAGCTTTGGGAAGAAGGTGTAAGAGATTACTTAAATCATGCTTCGAGGATTATGGAAAAGTTCAGTGATGTTGTCAACTGGCTCAAAGCAAATGCATCCAAGCCAGAAAATTCAGTTGCTGAGGCCAGTGCTGCTTTTTCTGCAAAAAAACTCTTGCCTGAAGTAGTAAACAAAGAAAATAAATCTTTTGGAGAAAAAACTGGGTTTACTCCTGTTACAACTCCTACAAGTTTTTCTAGTTCATGGAGTCCTGGATTATTTTCGAGCAGTCAAAGCATTTTTGGATTTGAAAATGAATTGGAGCAGCCTAGCAGCCCATCAGTTAAGAAGACAGAAGAGAAAGGTGTAGTTGTTGTACATGAAGTAAAGTGCAAGCTTTATGTGAAGCTTGATCTTGCTGTGTTCATTCCAATAATGTCTTTTACTTCGAGTGATCCAGCAGATAAAGATGTATGGAAAGATAAAGGAATGGGTCAACTGTCTATTAAATGCCAAGAAGGTGTCAGCAAGGCTACCAAAGAATCCAAACCTACAATTGTTGTTCGAAATGAGGTAGGAAAAATTCTTCTCAATGCCTTGTTGTATCCAGGAATCAAGACGAACCCGCAGAAGAACTCACTTGTTGCAATATTCCATACTACGGGTAATGCTGACGGAAGTGGGGATAACGATAGTGTAGTTGCACGTACATTCTTGATCCGAATGAAAACAGAAGATGATCGAAATAAGCTGGCTTCAACAATCCAAGAATATGCTCCAGTATCTTGA 1077 0.4058 MKGSKRLAVSEPNQVDTNEAPMQFRNKRIMEGSLFDVHRAEPSQQPTVTAPPLDMKRAESSQQHIYTLFWTFGLAYLVVVVIKRVVFIVITHWVQTQLKNHPDELWEEGVRDYLNHASRIMEKFSDVVNWLKANASKPENSVAEASAAFSAKKLLPEVVNKENKSFGEKTGFTPVTTPTSFSSSWSPGLFSSSQSIFGFENELEQPSSPSVKKTEEKGVVVVHEVKCKLYVKLDLAVFIPIMSFTSSDPADKDVWKDKGMGQLSIKCQEGVSKATKESKPTIVVRNEVGKILLNALLYPGIKTNPQKNSLVAIFHTTGNADGSGDNDSVVARTFLIRMKTEDDRNKLASTIQEYAPVS 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02490 358 MobiDBLite consensus disorder prediction 1 21 - -
Vimu7g02490 358 ProSiteProfiles Ran binding domain type 1 profile. 198 353 IPR000156 GO:0046907
Vimu7g02490 358 SUPERFAMILY PH domain-like 212 355 - -
Vimu7g02490 358 Pfam RanBP1 domain 250 353 IPR000156 GO:0046907
Vimu7g02490 358 Gene3D - 131 357 IPR011993 -
Vimu7g02490 358 CDD RanBD_NUP50 214 355 - -
Vimu7g02490 358 PANTHER RAN BINDING PROTEIN 24 355 IPR045255 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02490 K14295 - gmx:100816975 488.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02490 7 21234239 21239960 Vimu7g02490 7 21234239 21239960 ECH