Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02484 CGAAGTCAATCCATAACCCTCCCTCTCACATACACTGCCTTACTCTCTATTCTCCTTCACGTCCCCATCAACTACCTCCTCGTCTCCGTGTTCAAACTTGGAATCAAAGGCATCGCTTTAGGTGCCGTTTGGACCAATTTCAACCTTGTCTTTTCGTTGATTCTCTACATCTGGCTATCCCAAATATACAAGAAAACATGGTCCCCTATTTCCCTGAAGGGCATCTTCTGCGGTTGGAAGGCGCTTTTGGATTTGGCAATCCCGAGTTGCATTTCCGTTTGCCTGGAATGGTGGTGGTACGAAATCATGATTTTACTTTGCGGGTTATTGATCAATCCCCAAGCAACCGTTGCATCGATGGGGGTTCTGATTCAAACCACCGCATTGATATACATTTTCCCTTCTTCCCTGAGCTTTGCTGTTTCAACACGTGTTGGGAACGAAGTGGGTGCGGAGAATCCTAAAAGGGCCAAACTCGCAGCACTCGTGGGGCTTTCTTTCAGTTATGTTTTGGGATTGTCGGCCTTGTTTTTTGCTGTTTCGGTGAGGCACGTGTGGGCATCCATGTTCACACGTGACAAGGAGATCATTACTTTGACGTCGATGGTGTTGCCCATCATTGGTCTCTGCGAGCTTGGGAACTGTCCGCAAACAACGATTTGCGGCGTCCTGAGAGGCACCGCGAGACCGAAATTGGGAGCGAATATAAATTTGGGTTGCTTCTATATTGTGGGAATGCCCGTTGCGGTGTGGTTGGGTTTCTTCGCGGGCTTTGATTTCAGAGGTTTGTGGCTGGGTTTGTTGGCCGCCCAAGCCTCGTGCATGATCACCATGTTGTTCGTGTTGGCTCGTACCAACTGGGAGGGTCAGGTCGAAAGAGCCAAACAACTCACATCGTCTGATGCTACTGAGGAGGAACACGAACAGCAAGACCAATCCTCAACAGAGGAATGCTCTGATTCAAATGTTTGA 972 0.4877 RSQSITLPLTYTALLSILLHVPINYLLVSVFKLGIKGIALGAVWTNFNLVFSLILYIWLSQIYKKTWSPISLKGIFCGWKALLDLAIPSCISVCLEWWWYEIMILLCGLLINPQATVASMGVLIQTTALIYIFPSSLSFAVSTRVGNEVGAENPKRAKLAALVGLSFSYVLGLSALFFAVSVRHVWASMFTRDKEIITLTSMVLPIIGLCELGNCPQTTICGVLRGTARPKLGANINLGCFYIVGMPVAVWLGFFAGFDFRGLWLGLLAAQASCMITMLFVLARTNWEGQVERAKQLTSSDATEEEHEQQDQSSTEECSDSNV 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02484 323 MobiDBLite consensus disorder prediction 294 323 - -
Vimu7g02484 323 CDD MATE_eukaryotic 1 293 IPR045069 GO:0042910|GO:1990961
Vimu7g02484 323 PANTHER MULTIDRUG RESISTANCE PROTEIN 2 287 - -
Vimu7g02484 323 Pfam MatE 88 251 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Vimu7g02484 323 NCBIfam MATE family efflux transporter 1 264 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Vimu7g02484 323 MobiDBLite consensus disorder prediction 298 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02484 Vimu-Chr7 21201456 21203799 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02484 K03327 - gmx:100811560 565.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02484 7 21201456 21203799 Vimu7g02484 7 21201456 21203799 ECH
Vimu7g02484 7 21201456 21203799 Vimu7g02484 7 21201456 21203799 PCT