Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vimu7g02457 | ATGTATTTTCTGTATGTCAGGGTTGTCAAGGCTCGTGAGCTTCCTGCTATGGATATTACTGGGAGTCTTGATCCATTTGTTGAGGTGAGAATTGGCAATTACAAGGGCATTACCAGACACTTTGATAAGAATCAGAGTCCAGAATGGAACCAGGTGTTTGCCTTTTCAAAGGACCGGATGCAAGCATCCATACTAGATGTTGTAATAAAGGACAGGGATCTCATCAAAGATGATTTTGTTGGCATTGTGAGGTTTGACATCAATGAGGTTCCTTTGAGAGTCCCGCCAGATAGCCCTTTGGCTCCGGAGTGGTACCGTCTTGAGGACAAGAAAGGGGAGAAGATTAAAGGTGAGTTGATGCTTGCTGTCTGGATTGGTACTCAAGCAGATGCAGCCACACCTGTTGACAGCACACATGCTATCTCTGCAGTGATGCGTTCAAAGGTGTATCATGCGCCAAGGTTATGGTACGTGCGTGTCAATATTGTGGAGGCACAAGACTTGGTTCCTACAGAAAAAAACCGTTTCCCAGATGTGTATGCCAAGGTGCAGATAGGAAACCAAGTGCTGAAAACAAAGACAGTTCCGGCACGGACGCTGAGCGCACTCTGGAATGAGGATCTTTTATTTGTTGCTGCTGAACCTTTTGAAGATCATTTAATCATTTCAGTTGAAGATCGGGTTAGTCCTGGAAAAGATGAAATCATTGGGAGGGTCATCATACCACTGAACTCTGTGGAGAGGCGTGCGGATGATAGAATCATTCATTCTCGATGGTTCAACTTGAAGAAGGAAAAGTTTTCAAGCAGAATTCAGCTCCGGTTATGCCTAGATGGAGGATATCATGTTCTTGACGAGTCTACTCATTATAGCAGTGATCTCCGCCCCACAGCAAAGCAATTGTGGAAGCCGCCAATTGGGGTTTTGGAGCTTGGAGTACTGAATGCTGTAGGACTCCACCCAATGAAAACAAGGGATGGTAGAGGCACATCTGACACATACTGTGTAGCAAAATATGGTCACAAATGGGTCAGAACAAGGACCATTGTTGACAATCTGAGTCCAAAATACAACGAGCAATACACTTGGGAGGTTTTTGATCATGCCACAGTTCTTACAGTTGGTGTCTTCGACAACAGCCAGATCGGGGAAAAGGGTAACGGTACTTCGAAGGACTTGAAAGTTGGGAAGGTCAGAATTCGCATCTCTACTTTAGAAACAGGCAGGATTTACACTCACTCATATCCATTGTTGGTTCTTCACCCAACTGGGGTTAAGAAGATGGGTGAACTTCACTTGGCAATACGGTTTTCATGCACTTCTTTGGCAAACATGCTTTACTTGTACTCATGTCCACTGCTGCCTAAAATGCACTACGTTAGGCCTTTCTCTGTGACACAGCTAGACATGCTACGCCACCAAGCAATGAACATAGTGGCAGCACGACTCGGCCGAGCAGAGCCACCACTTCGCAAGGAAGTGGTGGAATACATGTCAGATGTGGACTCTCACCTTTGGAGCATGCGGCGAAGCAAGGCGAATTTCTTCAGACTGATGACTGTCTTCTCTGGTGTGTTCGCCGTTGGGAAGTGGTTCGGTGATATCTGCATGTGGAGAAATCCTATCACAACAGTGCTGGTTCATGTGCTGTTTCTCATGCTTGTGTGCTTCCCAGAATTGATCTTGCCCACTGTTTTCCTCTACATGTTTTTGATAGGGGTGTGGAACTTCAGATATAGACCAAGGTACCCTCCTCACATGAACACAAGAATCTCACAAGCTGAGGCAGTGCACCCTGATGAATTGGATGAAGAGTTTGACACTTTCCCAACGAGCAGAAGCCCAGACCTTGTGAGAATGAGGTATGATCGCTTGAGGAGTGTGGCTGGAAGGATTCAAACAGTGATTGGGGATTTGGCTAGCCAGGGAGAAAGGATTCAGGCACTGTTAAGCTGGAGAGACCCTCGTGCTACATCCTTATTTATTACATTGTGTCTTCTATCCGCTTTGGTGCTCTATGTTACCCCTTTTCAAGCTGTGGCTGGTTTGGCAGGTTTCTACATCATGAGGCATCCAAGGTTTCGCCACAGGCTGCCATGTGTCCCAATCAACTTTTTCCGACGCCTCCCTGCAAGAACAGACAGTATGTTGTAG | 2154 | 0.4619 | MYFLYVRVVKARELPAMDITGSLDPFVEVRIGNYKGITRHFDKNQSPEWNQVFAFSKDRMQASILDVVIKDRDLIKDDFVGIVRFDINEVPLRVPPDSPLAPEWYRLEDKKGEKIKGELMLAVWIGTQADAATPVDSTHAISAVMRSKVYHAPRLWYVRVNIVEAQDLVPTEKNRFPDVYAKVQIGNQVLKTKTVPARTLSALWNEDLLFVAAEPFEDHLIISVEDRVSPGKDEIIGRVIIPLNSVERRADDRIIHSRWFNLKKEKFSSRIQLRLCLDGGYHVLDESTHYSSDLRPTAKQLWKPPIGVLELGVLNAVGLHPMKTRDGRGTSDTYCVAKYGHKWVRTRTIVDNLSPKYNEQYTWEVFDHATVLTVGVFDNSQIGEKGNGTSKDLKVGKVRIRISTLETGRIYTHSYPLLVLHPTGVKKMGELHLAIRFSCTSLANMLYLYSCPLLPKMHYVRPFSVTQLDMLRHQAMNIVAARLGRAEPPLRKEVVEYMSDVDSHLWSMRRSKANFFRLMTVFSGVFAVGKWFGDICMWRNPITTVLVHVLFLMLVCFPELILPTVFLYMFLIGVWNFRYRPRYPPHMNTRISQAEAVHPDELDEEFDTFPTSRSPDLVRMRYDRLRSVAGRIQTVIGDLASQGERIQALLSWRDPRATSLFITLCLLSALVLYVTPFQAVAGLAGFYIMRHPRFRHRLPCVPINFFRRLPARTDSML | 717 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vimu7g02457 | 717 | ProSiteProfiles | C2 domain profile. | 1 | 105 | IPR000008 | - | |
| Vimu7g02457 | 717 | ProSiteProfiles | C2 domain profile. | 290 | 415 | IPR000008 | - | |
| Vimu7g02457 | 717 | Pfam | C2 domain | 308 | 417 | IPR000008 | - | |
| Vimu7g02457 | 717 | Pfam | C2 domain | 4 | 98 | IPR000008 | - | |
| Vimu7g02457 | 717 | Pfam | C2 domain | 156 | 261 | IPR000008 | - | |
| Vimu7g02457 | 717 | PANTHER | PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1 | 1 | 717 | IPR047259 | - | |
| Vimu7g02457 | 717 | FunFam | C2 domain-containing protein | 144 | 277 | - | - | |
| Vimu7g02457 | 717 | Pfam | Plant phosphoribosyltransferase C-terminal | 562 | 717 | IPR013583 | - | |
| Vimu7g02457 | 717 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 2 | 135 | IPR035892 | - | |
| Vimu7g02457 | 717 | CDD | C2C_MCTP_PRT_plant | 157 | 296 | IPR047258 | - | |
| Vimu7g02457 | 717 | FunFam | C2 domain-containing protein | 290 | 441 | - | - | |
| Vimu7g02457 | 717 | SMART | C2_3c | 308 | 414 | IPR000008 | - | |
| Vimu7g02457 | 717 | SMART | C2_3c | 3 | 99 | IPR000008 | - | |
| Vimu7g02457 | 717 | SMART | C2_3c | 157 | 255 | IPR000008 | - | |
| Vimu7g02457 | 717 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 156 | 298 | IPR035892 | - | |
| Vimu7g02457 | 717 | CDD | C2D_MCTP_PRT_plant | 308 | 434 | IPR047255 | - | |
| Vimu7g02457 | 717 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 307 | 439 | IPR035892 | - | |
| Vimu7g02457 | 717 | CDD | C2B_MCTP_PRT_plant | 3 | 127 | IPR047257 | - | |
| Vimu7g02457 | 717 | FunFam | C2 domain-containing protein | 1 | 143 | - | - | |
| Vimu7g02457 | 717 | Gene3D | C2 domain | 138 | 277 | IPR035892 | - | |
| Vimu7g02457 | 717 | Gene3D | C2 domain | 1 | 125 | IPR035892 | - | |
| Vimu7g02457 | 717 | Gene3D | C2 domain | 304 | 441 | IPR035892 | - | |
| Vimu7g02457 | 717 | ProSiteProfiles | C2 domain profile. | 135 | 260 | IPR000008 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vimu7g02457 | Vimu-Chr7 | 21025205 | 21027421 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Vimu7g02457 | 1 | 717 | Lipid Metabolism Gene Families | AT4G11610 | 79.539 | 0.0 | 1265 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vimu7g02457 | - | - | gmx:106799047 | 1413.67 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Vimu7g02457 | 7 | 21025205 | 21027421 | Vimu7g02457 | 7 | 21025205 | 21027421 | ECH |