Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02452 GCAGATGAAATGAGGTACATGAAGCCCTTGCAGTTGTTTCAGCATTTGAGTAATTCAACCCGAAACCAACGGGGAAGGTTGCTGGGTTTGGATGTCGGGGAGAAATATGTTGGCCTTGCTCTTTCTGACTTTGACAACAAAATTGCTTCACCTTTCAGTGTTCTCGTCAGGAAGAAGTCAAATATTTGTTTAATGGCTTCTGATTTTCAGAATCTGATGTCTAAATATTCCCTGAAGGGATTTGTTGTTGGCCTCCCTTTTGACAGGCATCGGGTGGCTTCTGAAGCTGCACCGGTGAAGATCTTAATTGATCACCTCTGTAGAACAAAAATGCTCGAAGGAGTAAAGTATACATATTGGAATGAGTGCTTTACATCAAAGAATGTGGAATTGCTGTTAAAGCCTTTGAACTTGAATCATCCAGTACTCTCCAAGACTATTCTAGACAAGTTTGCAGCGGTAGGAATACTTCAAGTGAGTTCTTTGAGCTGCTTCTTGACATAA 504 0.4127 ADEMRYMKPLQLFQHLSNSTRNQRGRLLGLDVGEKYVGLALSDFDNKIASPFSVLVRKKSNICLMASDFQNLMSKYSLKGFVVGLPFDRHRVASEAAPVKILIDHLCRTKMLEGVKYTYWNECFTSKNVELLLKPLNLNHPVLSKTILDKFAAVGILQVSSLSCFLT 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02452 167 Hamap Putative pre-16S rRNA nuclease [yqgF]. 25 165 IPR005227 GO:0006364
Vimu7g02452 167 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN 2 158 IPR005227 GO:0006364
Vimu7g02452 167 Gene3D - 24 162 IPR037027 GO:0006139
Vimu7g02452 167 Pfam Holliday junction resolvase 26 158 IPR005227 GO:0006364
Vimu7g02452 167 SMART rnase_8s 25 129 IPR006641 GO:0006139
Vimu7g02452 167 CDD YqgF 27 158 IPR005227 GO:0006364
Vimu7g02452 167 FunFam Putative pre-16S rRNA nuclease 24 163 - -
Vimu7g02452 167 SUPERFAMILY Ribonuclease H-like 25 158 IPR012337 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02452 - - gmx:100305864 253.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02452 7 21000065 21001683 Vimu7g02452 7 21000065 21001683 ECH