Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02444 ATGGCTTCGGAGAAGATCTGCTCGATTCTCTTATTTTCTGCAGTTATATTGCTTCTCCAAGATGCCCCTTCTGTCTTAGCTGGGGACATAGTTCATGACGACGATTCTACTCCCAAGAAGCCGGGTTGCGCGAACCAGTTCGTTCTGGTACTGGAGGCATGCGTGGTCATGGAGCATCACAATCATATTGTAAAAGTGCAAACTTGGGTTAACGGTGTAGAGGATGCTGAATTTGTTGGTGTGGGTGCCAGATTTGGCAGAGCCATTGTGTCAAAAGAGAAAAATGCAAAACATACACGCCTTATTCTTTCAGATCCTCGTGATTGTTGCAGCCCGCCAAAGAATAAGATTGTGGGAGATGTCATCATGGTGGATCGAGGCAACTGTACATTCACAAGAAAGGCAAATACTGCACAAAATGCAAATGCTTCAGCCATCCTCATTATAAATAACCAAAAAGAACTCTACAAGATGGTTTGCGATCCTGATGAAACTGATTTGAACATACATATACCTGCAGTCATGCTTCCACTAGATGCAGGTGCAAGACTAGAAAAAATGCTGACAAGTACTTCATCTGTGTCGGTGCAGCTATACTCACCACGTAGACCACCTGTTGACATAGCAGAAGTATTTCTTTGGATGATGGCAGTTCTTACCATATTGTGTGCATCATATTGGTCAGCTTGGACAGCCCGAGAAGCAGCTATTGAACAGGATAAGCTCCTAAAGGATGCTTCAGATGAAATCCCTAACACTAAATATGCTAGTGTTAGTGGAGTTGTAAATATGAACGTGAAAGCTGCAGTCCTTTTTGTTGTATTTGCTTCATGTTTCCTGTTTATGCTTTACAAACTGATGTCGTCGTGGTTCATTGATGTTTTGGTTGTTCTCTTCTGCATTGGTGGGATTGAGGGATTGCAAACTTGCTTGGTTGCTCTTTTGTCCAGGTGGTTCAAGCATGCTGGAGAGGCATACATCAAAGTACCTTTCTTGGGATCTATCTCATACCTGACTTTGGCTGTTTCTCCATTCTGTACAACATTTGCCGTTCTTTGGGCAGTTTATCGTAACAATTCCTTTGCCTGGATTTGTCAAGACATACTCGGAATTGCACTGATTATAACAGTTCTACAGATTGTACATGTACCAAATCTCAAGGTTGGTACTGTTCTTCTCGGCTGTGCTTTCATCTACGACATCTTTTGGGTGTTTGTCTCAAAGAAGTTCTTCAAGGAAAGTGTCATGATTGTGGTAGCCCGAGGTGATCGAAGTGGAGAAGATGGAATTCCAATGTTACTAAAGTTCCCACGTATTTTTGATCCATGGGGTGGCTACAGCATCATAGGTTTTGGAGACATCCTTTTACCTGGAATGCTGGTGGCATTCTCACTCAGGTACGATTGGCTGGCAAACAAGAGCCTTAGAGGTGGATATTTCTTGTGGGCAATGTTTGCATATGGCTTTGGTCTTTTAGTTACGTATGTGGCACTGAACTTGATGGACGGACATGGCCAACCAGCACTACTATACATCGTTCCATTTACCCTTGGAACCTTGATGACATTGGGGAAGAAGCGAGGAGATTTGAAAGGTTTGTGGAGAAATGGAGAACCTCAAAAACACTGCCCACATTTAAGACTCCAAAACAGTGAAGAATTAAGCCCTGAATGA 1674 0.4295 MASEKICSILLFSAVILLLQDAPSVLAGDIVHDDDSTPKKPGCANQFVLVLEACVVMEHHNHIVKVQTWVNGVEDAEFVGVGARFGRAIVSKEKNAKHTRLILSDPRDCCSPPKNKIVGDVIMVDRGNCTFTRKANTAQNANASAILIINNQKELYKMVCDPDETDLNIHIPAVMLPLDAGARLEKMLTSTSSVSVQLYSPRRPPVDIAEVFLWMMAVLTILCASYWSAWTAREAAIEQDKLLKDASDEIPNTKYASVSGVVNMNVKAAVLFVVFASCFLFMLYKLMSSWFIDVLVVLFCIGGIEGLQTCLVALLSRWFKHAGEAYIKVPFLGSISYLTLAVSPFCTTFAVLWAVYRNNSFAWICQDILGIALIITVLQIVHVPNLKVGTVLLGCAFIYDIFWVFVSKKFFKESVMIVVARGDRSGEDGIPMLLKFPRIFDPWGGYSIIGFGDILLPGMLVAFSLRYDWLANKSLRGGYFLWAMFAYGFGLLVTYVALNLMDGHGQPALLYIVPFTLGTLMTLGKKRGDLKGLWRNGEPQKHCPHLRLQNSEELSPE 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02444 557 Pfam PA domain 110 184 IPR003137 -
Vimu7g02444 557 PANTHER SIGNAL PEPTIDE PEPTIDASE 89 546 IPR007369 GO:0004190|GO:0016020
Vimu7g02444 557 SMART psh_8 260 527 IPR006639 GO:0004190|GO:0016020
Vimu7g02444 557 SUPERFAMILY PA domain 116 192 IPR046450 -
Vimu7g02444 557 FunFam Signal peptide peptidase-like 3 63 202 - -
Vimu7g02444 557 Gene3D - 66 202 - -
Vimu7g02444 557 Pfam Signal peptide peptidase 261 538 IPR007369 GO:0004190|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02444 Vimu-Chr7 20923289 20928764 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02444 K09597 - gmx:100796300 1005.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02444 7 20923289 20928764 Vimu7g02444 7 20923289 20928764 ECH