Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02436 ATGCCTGTGCTACCTTTCCCATACTCAGCATCTCCCACTCCATCTCTCCACTTGTCTCACCAAAAGGGTCTTAAAACAAAACCAAATTCCAAATCAAGCGCTTTCTCACCAATCCAATGCTGTCACAGCCAAACGGAGCCATTCCTACTGAATGGCCTGGCCAGAGTTTCGGAGAAGATTCCTCTGAGCAACCCTTCCGGCGTGGCTGTTCCACCCAGGCCTCGAAGGATAATCCTTGTTAGGCATGGAGAGAGTGAAGGAAACATGGATGAGAGCGTCTACACAAGGATACCTGATCCCAAGATATCGCTCACCGAGAAAGGGAGGGCACAAGCCGAGGCATGTGGCAACAGGATAAAACAAATGATTGAGCCAGAACACGGACAACACTGGCAGGTTTACTTCTACGTGTCGCCGTATCGAAGGACCCTTCAAACCTTGCAGCACCTCGCTCGTCCCTTTGAACGTTCTAGAATCGCTGGTTTCAGGGAAGAACCTCGCATTCGGGAACAGGATTTTGGTAGTATATATTAG 534 0.4963 MPVLPFPYSASPTPSLHLSHQKGLKTKPNSKSSAFSPIQCCHSQTEPFLLNGLARVSEKIPLSNPSGVAVPPRPRRIILVRHGESEGNMDESVYTRIPDPKISLTEKGRAQAEACGNRIKQMIEPEHGQHWQVYFYVSPYRRTLQTLQHLARPFERSRIAGFREEPRIREQDFGSIY 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02436 177 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 79 88 IPR001345 GO:0003824
Vimu7g02436 177 Gene3D - 73 177 IPR029033 -
Vimu7g02436 177 MobiDBLite consensus disorder prediction 12 35 - -
Vimu7g02436 177 CDD HP_PGM_like 76 171 IPR013078 -
Vimu7g02436 177 SMART PGAM_5 76 177 IPR013078 -
Vimu7g02436 177 SUPERFAMILY Phosphoglycerate mutase-like 74 175 IPR029033 -
Vimu7g02436 177 PANTHER BROAD-RANGE ACID PHOSPHATASE DET1 72 174 - -
Vimu7g02436 177 MobiDBLite consensus disorder prediction 1 35 - -
Vimu7g02436 177 Pfam Histidine phosphatase superfamily (branch 1) 77 175 IPR013078 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02436 Vimu-Chr7 20878195 20878728 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02436 - - gmx:100800012 274.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02436 7 20878195 20878728 Vimu7g02436 7 20878195 20878728 ECH