Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02427 ATGGAAGATCTTCAAAATTCGGCTCTAAAGTTCTTCTCCGATCAAGAGCTCTGTAATGCCGATATCGTCCCTCCTGCTCAGGTTAGAGCGAGAATTGAAGTTTCTGTCCTCAATTTTCTCAAAATATTAAATGCATCAAGCCCTGCCATCTCAGATTTGCCTTTGATTCAGAGGAAATATAGCAATAGTCGAGTGAATCATGGCCTTTTGACAGAACTTTCACGTGTTTTTCTCACCAATTCCATATCGACAAGATCTCTGATGAGACCTAATGCAGCAAAGGCCTTCGTTAGGGGTGATGGAGATGTGCTATCAGATATTGCTTCAGGAAAAGCGGGTCACGCAGAGGGAGCTCTTCTACAAGTTGCTCTCCGATACAGTCTTGGAATCATGGCTTCCAGTCGAGGACTCATAGCTGGCCGTCTGACTTTGCAGGAACCGGGCAAAGAGGTTGTTGATTGCTCTTTGTGTGGTTCTTCTGGATTTGCAATTTCTGGTGATTTGAATTTGTTAGAGAGATTGGTTCTACATGCAGATGCTCGGTACATTATAATTGTGGAAAAGCGGCTTACTGAGGATCGGTTCTTTCATCAAATTCCGAGCATTCTTATCACTGCTAAAGGCTATCCAGACATGGCAACAAGATTTCTTCTTTATCGGATCAATCGAGCTTTTCCAGACTTGCCAATTTTAGCTTTGGTGGATTGGAACCCAGCTGGATTAGCCATTCTATGCACCTTCAAATTTGGAAGTGTAGGAATGGGCCTAGAGGCTTACAGATACGGACTGCGGAGTAATGATCTACCTTTGGTGCCTGATCAATCTTTCGTTCCATTGAAGCCAAAGGATCTGCAAATTGCTCGAAGCTTGATGTCCTCAGGAATATTACAGGATAATTACAAGGATGAAGTGGCCGTAATGATTCAAAGAGGAAGGAGAGCTGAAATCGAGGCTCTATACTTTCATGGATATGACTATTTGGGGAAGTATATTGCTAAAAAAATTGTACAGTCCGATTACGTATGA 1026 0.4269 MEDLQNSALKFFSDQELCNADIVPPAQVRARIEVSVLNFLKILNASSPAISDLPLIQRKYSNSRVNHGLLTELSRVFLTNSISTRSLMRPNAAKAFVRGDGDVLSDIASGKAGHAEGALLQVALRYSLGIMASSRGLIAGRLTLQEPGKEVVDCSLCGSSGFAISGDLNLLERLVLHADARYIIIVEKRLTEDRFFHQIPSILITAKGYPDMATRFLLYRINRAFPDLPILALVDWNPAGLAILCTFKFGSVGMGLEAYRYGLRSNDLPLVPDQSFVPLKPKDLQIARSLMSSGILQDNYKDEVAVMIQRGRRAEIEALYFHGYDYLGKYIAKKIVQSDYV 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02427 341 Gene3D - 134 341 - -
Vimu7g02427 341 PRINTS DNA topoisomerase VI subunit A family signature 125 140 IPR002815 GO:0003677|GO:0003918|GO:0005694
Vimu7g02427 341 PRINTS DNA topoisomerase VI subunit A family signature 202 223 IPR002815 GO:0003677|GO:0003918|GO:0005694
Vimu7g02427 341 PRINTS DNA topoisomerase VI subunit A family signature 235 251 IPR002815 GO:0003677|GO:0003918|GO:0005694
Vimu7g02427 341 SUPERFAMILY DNA topoisomerase IV, alpha subunit 124 341 IPR036078 GO:0003677|GO:0005694
Vimu7g02427 341 PANTHER MEIOTIC RECOMBINATION PROTEIN SPO11 124 340 IPR002815 GO:0003677|GO:0003918|GO:0005694
Vimu7g02427 341 CDD TOPRIM_TopoIIB_SPO 181 326 IPR034136 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02427 Vimu-Chr7 20780285 20782994 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02427 K10878 - gmx:100784732 533.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02427 7 20780285 20782994 Vimu7g02427 7 20780285 20782994 ECH