Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02423 ATGATGGTGTTGATGATATCTGTAAAGGGTGCCTGTGAAATTGGATGGTTCCAAACGAAAGAATCACAAGAACTTCTTACTATTTTGGATGAGATCGGAAAAGTCTTCAGCAGTATGGGGAGTATAAATGCTACACCTAGACAATGCAGTTCTGAAATATCAACTATAATGGAGAAGTTCTATCCCCATGTTAAATTGGGTTCAATACTTGCATCAATTGAGATCCAGCCTGGATATGGAGCTTCTCTGGTTGGTTTTCATATTACCAAGAGTGAATTTGTTAAAGAGAAACTTTTTTTATTGGTGGCACAGATAGATAACATTGAGATATCAGCATGCCTCATAAGTCCTCCGCAAGCGAATTTTCTCCTCAATGGAAAAGGAGTAGCCAATAGGACTTATGTTGAAATGGATCCTGGACCACAAATGCCAACTGATGTGACTGCTATGCTTAAATTTGGGACAAATCTTCTTCAAGCTGTGGGCCAGTTCAATGGTCGTTACATTGTACTCGTTGCCTATATGAGTTTTACACCCTTGCATGAAGATCCAGTTCTTCAAGATTATCTCCAGCCTGCTGTTACCTCTACTGATTCTGATTCAGATATTGTTGAGGGGGCTTCGCAGATTTCGCTAAATTGTCCAATAAGCTTTACACGTATTAAGACTCCTGTCAAAGGGCGATCATGCAAACATTTCCAGTGTTTTGACTTTAACAACTTCATTAGTATCAATTCTAAAAGGCCATCCTGGCGCTGCCCTCATTGCAATCAGTATGTCTGTTATGCTGATGTTCGACTTGACCGAAACATGGTTGAGATCCTGAAAAATGTTGGTGAGAGCATTACGGAAGTGATTGTCCTTGCTGATGGATCTTGGAAGGCAGTCTTGGAAAAGGATCATGACGTGGATAAGATGCAAAAGAAGGCCCCCAACCATGAAAAGGAACAAACTGAACCACAAGAACATACTTGCTCTCCTGCAACTGTTGATCTCACAGAAGATGATGATCATGTGGAGGCAATGGACTCTTCTGAAATTGTAGATAGAAAACCTCTCCAGTCATCTGTTCAAAGTCACTTTCTCGCTCCAAATTCAACTTCCTTGGGTATGAACACTCCTGGGGTTAATCGAAATGTTGCTGGTCAAATGGATGACTTTTTGTCTGGGGTTTATATTGCGCGTAGTAGGTCTGATACCCCAATGGTTGGTACCTTGGAGCTACCTGTTCTGCCCGATACTATTTCTCCAGCATTTAATCAGGAATCTGCAGGTCGTGACAATAACCCTGCTGTTAACTCTGCCATGCGTAATCAAATTGCAGCACCAAATAATTTGCCGATGCAGATGAATCATATGAATTCAGTTAACGAGTATGGTAGGTCGTCTTCGGTGCCAAGACATATTACTAGAACTCCAGTAGCTGTTCAGGCCCTCCCAGTCCAATCTCAGGCATCGGGAGATACTTTGAAAGCCATACTTAGTGATACTGAAAGACAGCAACGTTTTTCTCGAACCCCAATAAATCTGCCTCAGGTCTCAGGTGTGAATTCACCTGCATTTCGGCATCACAATGCAACACAGAATCGGGTACCATTACAGAACCCGCCAACATCAACTCAATTGCAGAACCCATACAGACCAGGTTCAATATCTGATTTTAGCAATCCACACCTGCAGCAATCTCTGAATAATCTTCTGCCATCTCGACAGCATTCAAATTTCCGACCATCTACTACCCCATGGTCTCACATCCAGCAAGGTGTTCCACAATCTGGGAATTTAAAGGCGGCAGGCATGGCTGCTCCACCGGCTGCCAGACAAGGTATTTCCAACGCTAGGAATGTTCCGCCAGCTGCTACCACTGCTCATAGCCAACAATCTAGGGGTTTGGCCGCTAATCAGCCTCCTAGATGGACGCCACCACTAGTTCCGGTCCAAAATCAAAGCGGTGCTGCAGGTACACCTTTTGCAACTGACAGTTTCCAGGGAAGAGGAAACACAGCCCATTCAGTCTCTAGGCCTGATGAATTATTCAGTACGCCACCAGAACAGAATTGGGCTCCCACTGGACGAATGCGTGGAAGTCTAGATTTAAGTCAGCCTTTCGACGAGTCTATTGCACAGCGAATAATTACTCCAACACAAACTCAAGTTTCAAGACCACCACCTCCACAACCTCTCCGACGAGCCACTGGGTCGACCCAACAGGATGTGCTCATTGCTAACAGAAATGCAAATACTCACAATCGTCCTTCCACTTGA 2265 0.4406 MMVLMISVKGACEIGWFQTKESQELLTILDEIGKVFSSMGSINATPRQCSSEISTIMEKFYPHVKLGSILASIEIQPGYGASLVGFHITKSEFVKEKLFLLVAQIDNIEISACLISPPQANFLLNGKGVANRTYVEMDPGPQMPTDVTAMLKFGTNLLQAVGQFNGRYIVLVAYMSFTPLHEDPVLQDYLQPAVTSTDSDSDIVEGASQISLNCPISFTRIKTPVKGRSCKHFQCFDFNNFISINSKRPSWRCPHCNQYVCYADVRLDRNMVEILKNVGESITEVIVLADGSWKAVLEKDHDVDKMQKKAPNHEKEQTEPQEHTCSPATVDLTEDDDHVEAMDSSEIVDRKPLQSSVQSHFLAPNSTSLGMNTPGVNRNVAGQMDDFLSGVYIARSRSDTPMVGTLELPVLPDTISPAFNQESAGRDNNPAVNSAMRNQIAAPNNLPMQMNHMNSVNEYGRSSSVPRHITRTPVAVQALPVQSQASGDTLKAILSDTERQQRFSRTPINLPQVSGVNSPAFRHHNATQNRVPLQNPPTSTQLQNPYRPGSISDFSNPHLQQSLNNLLPSRQHSNFRPSTTPWSHIQQGVPQSGNLKAAGMAAPPAARQGISNARNVPPAATTAHSQQSRGLAANQPPRWTPPLVPVQNQSGAAGTPFATDSFQGRGNTAHSVSRPDELFSTPPEQNWAPTGRMRGSLDLSQPFDESIAQRIITPTQTQVSRPPPPQPLRRATGSTQQDVLIANRNANTHNRPST 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02423 754 MobiDBLite consensus disorder prediction 730 754 - -
Vimu7g02423 754 MobiDBLite consensus disorder prediction 614 634 - -
Vimu7g02423 754 SUPERFAMILY RING/U-box 210 285 - -
Vimu7g02423 754 MobiDBLite consensus disorder prediction 305 329 - -
Vimu7g02423 754 MobiDBLite consensus disorder prediction 609 691 - -
Vimu7g02423 754 MobiDBLite consensus disorder prediction 528 597 - -
Vimu7g02423 754 MobiDBLite consensus disorder prediction 305 321 - -
Vimu7g02423 754 CDD SP-RING_PIAS-like 211 258 - -
Vimu7g02423 754 MobiDBLite consensus disorder prediction 528 593 - -
Vimu7g02423 754 PANTHER ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN 2 359 - -
Vimu7g02423 754 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 181 295 IPR013083 -
Vimu7g02423 754 MobiDBLite consensus disorder prediction 711 754 - -
Vimu7g02423 754 ProSiteProfiles Zinc finger SP-RING-type profile. 199 280 IPR004181 GO:0008270
Vimu7g02423 754 Pfam MIZ/SP-RING zinc finger 210 258 IPR004181 GO:0008270
Vimu7g02423 754 MobiDBLite consensus disorder prediction 644 687 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02423 K04706 - gmx:100780539 1084.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02423 7 20751451 20764817 Vimu7g02423 7 20751451 20764817 ECH