Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02417 ATGGAAGCTTTCACCTTGCTCAAATACTGGAGAGGCGGTGGCGCTCTCGGAATCCCGCCTTCCTCCGACACTCCCTCTTCACGCGCCGCCCCCACCACCACTATCCTCACCGCTGTCGAAAACGAAAATGCAACCGAAAGCGACGAAGACAACGACGACGACGGACCCTTCTTCGACTTAGAGTTCACCGTTCCCGACGAAGAAGCTAACGAAAATACAAACGGCAACAACACCAGAGAAGACGGCGAAGACGAAGAAGAAGAAGAAGAAGAAGATATAAACATCGAAGAATCAGACGGCGAGAGAGAGTTTAAGTTTACTCTGTCCCCTTCGAGCAACGATCGTAGTGATCCCAACCTTTCGCTGTCTCCGTCGGAGGATCTGTTTTTCAAGGGAAAGCTGCTGCACGTGGACCCTTCCTCTTTCTCCTCCGAACCTAACTCCAAGCCTCAGTTCACCGCCTCCCTACTAAAATCCGCCACCAAATTCCGCGTCTTCATGTTGGGCCTCAAGAAGCCCAAGCCCACTGACAAAGACAAGGACGCCAACGCCACCACCAACAACAACGTTTCCGATTCCGCAAATCCAGAGGCCCACAAAGACAAGAAGCACTTCACCGTCAAATTCAAAGTGGAAGAGGTCCCCATCGTCTCTCTCTTCACCTCCAAAGGAAACAACAAAACCCAAAAACACACTTCCAACGAACAACCACCACCGTCCGAAGAGAAGCGTTTCACCAAAGAAGTCGTGCAAAAATATTTCAAAATGGTTAAGCCTCTCTACGTCAGAGTCTCCCGCCGCTACGCCGACAAGCTCACCTTAAACTCCGCCGCTAAATCACCTCTTCCAACGCCCACGCCCGAACCCGAACCTGTTGTCGCAGCCGCCGCCGCCGAAACTAACCTCAAGACAACTCAAACACAAAAACTATCTGCAGGGCTTAGCGTCGTGTGTAAACAATTAGGGAAAAGCCGCTCGGCGTCTTCGGCTGTGGCGGCGGCTCCGCCGCCATTTGTGTCTTCGAAGCGGCGCGATGACTCGCTGTTGCAGCAACAGGATGGAATTCAGGGTGCCATTTTACATTGCAAGAGATCCTTCAATGCCTCCAGAGCTGAGTGCGAGTCTTCTCAGCTTCCGCGTTCGGTGAGCCATCCATCGCACGAGATATCCATGAATGAAGGCAATGAGAAGCGCCTTTCGACATGA 1206 0.5232 MEAFTLLKYWRGGGALGIPPSSDTPSSRAAPTTTILTAVENENATESDEDNDDDGPFFDLEFTVPDEEANENTNGNNTREDGEDEEEEEEEDINIEESDGEREFKFTLSPSSNDRSDPNLSLSPSEDLFFKGKLLHVDPSSFSSEPNSKPQFTASLLKSATKFRVFMLGLKKPKPTDKDKDANATTNNNVSDSANPEAHKDKKHFTVKFKVEEVPIVSLFTSKGNNKTQKHTSNEQPPPSEEKRFTKEVVQKYFKMVKPLYVRVSRRYADKLTLNSAAKSPLPTPTPEPEPVVAAAAAETNLKTTQTQKLSAGLSVVCKQLGKSRSASSAVAAAPPPFVSSKRRDDSLLQQQDGIQGAILHCKRSFNASRAECESSQLPRSVSHPSHEISMNEGNEKRLST 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02417 401 MobiDBLite consensus disorder prediction 220 235 - -
Vimu7g02417 401 MobiDBLite consensus disorder prediction 325 345 - -
Vimu7g02417 401 MobiDBLite consensus disorder prediction 170 201 - -
Vimu7g02417 401 MobiDBLite consensus disorder prediction 105 123 - -
Vimu7g02417 401 Coils Coil 79 99 - -
Vimu7g02417 401 MobiDBLite consensus disorder prediction 220 246 - -
Vimu7g02417 401 MobiDBLite consensus disorder prediction 20 42 - -
Vimu7g02417 401 MobiDBLite consensus disorder prediction 80 97 - -
Vimu7g02417 401 MobiDBLite consensus disorder prediction 43 66 - -
Vimu7g02417 401 MobiDBLite consensus disorder prediction 370 389 - -
Vimu7g02417 401 PANTHER MEMBRANE-ASSOCIATED KINASE REGULATOR 2-RELATED 1 390 IPR039619 GO:0005886
Vimu7g02417 401 MobiDBLite consensus disorder prediction 11 125 - -
Vimu7g02417 401 MobiDBLite consensus disorder prediction 370 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02417 Vimu-Chr7 20704983 20706303 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02417 - - gmx:100807473 496.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02417 7 20704983 20706303 Vimu7g02417 7 20704983 20706303 ECH
Vimu7g02417 7 20704983 20706303 Vimu11g04468 11 65755395 65757599 PCT