Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02411 ATGCACTCTCTCTCTCTAACACAAACCTTCCTACGCTCGCATTCACTCTCTTCATTCGCCTCATCTTCTTTTCTTCTCCTTCTTCCTCCTTCCACTCTTCGCAACTCTAAGAAGCTGCAATTCTCACCCTTCGCCACCTCTTCCTCAATTCCCCCAAATGAAACCAAATTCCCAACGCAGGGATTCTCTCATTCTTGCAAGAATTCCAACGATTCACTCGAATCACATGCTCGAATCTCCAATTGGAAATTCCCCTTAGCTCCAATTGCTCATTCTAATTTATCCGTCAGGCTTCTCAAGTTTATGATGCTCTTTGGCTTCCTCACACTTAAACACTCTTATCCCGCTCATGCTTCCTCTGACTTTTCCAGTGCTTTCAGTTTATCTCCTGAATTTGGGGATTTTGATGACATAAGCACAGGTTTTGCTTCAGCGTTTCTGCTGATATTTTTCTCTGAACTGGGAGATAAGACCTTTTTCATTGCAGCCCTGCTTGCAGCTAGGAATACAGCTGGTGTTGTTTTTATTGGGACGTTTAGCGCACTTGCGGCAATGACTCTGATCTCTGTTGTCCTTGGGAGAACTTTTCATTATGTTGATGAAATCTTGCCATTCAGGTTTGGAGAAACAGATTTACCTATTGATGATATAGCTGCTGTTTGCCTATTGGTGTACTTTGGGGTCTCTACCCTGCTGGATGCCTCATCTAGTGATGGCCAAAAATCAGATGAAGAGCAGAAGGAGTTTGAACTTGTTCACAATGGTCGGGGTTCACAATATTTTATTTTATTGGGTTCAAGCAATTTAATGTTTGCTTTTGTTAACCAGGCAGAGCTAGCAGTTTCTGAATTTTCTGGAAATGGTGCTGGAATACTATCTGCTGCTAGCACAGCTGCCAGTACTTTTCTCTTAGTTTTTGTCGCCGAATGGGGTGATAAGTCATTTTTCTCCACAATTGCCCTTGCAGCAGCTTCTTCTCCCCTTGGAGTCATAGCTGGAGCACTGGCGGGTCATGGTGTTGCAACTTTGGTAACCCCTTCTTCAGTTATAAATTGA 1056 0.4328 MHSLSLTQTFLRSHSLSSFASSSFLLLLPPSTLRNSKKLQFSPFATSSSIPPNETKFPTQGFSHSCKNSNDSLESHARISNWKFPLAPIAHSNLSVRLLKFMMLFGFLTLKHSYPAHASSDFSSAFSLSPEFGDFDDISTGFASAFLLIFFSELGDKTFFIAALLAARNTAGVVFIGTFSALAAMTLISVVLGRTFHYVDEILPFRFGETDLPIDDIAAVCLLVYFGVSTLLDASSSDGQKSDEEQKEFELVHNGRGSQYFILLGSSNLMFAFVNQAELAVSEFSGNGAGILSAASTAASTFLLVFVAEWGDKSFFSTIALAAASSPLGVIAGALAGHGVATLVTPSSVIN 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02411 351 Pfam Uncharacterized protein family UPF0016 144 227 IPR001727 -
Vimu7g02411 351 Pfam Uncharacterized protein family UPF0016 300 344 IPR001727 -
Vimu7g02411 351 ProSitePatterns Uncharacterized protein family UPF0016 signature. 153 162 IPR001727 -
Vimu7g02411 351 PANTHER TRANSMEMBRANE PROTEIN HTP-1 RELATED 125 344 IPR001727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02411 Vimu-Chr7 20656097 20659096 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02411 - - gmx:100809618 385.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02411 7 20656097 20659096 Vimu7g02411 7 20656097 20659096 ECH