Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02409 ATGAAAAGCGAGGAAGAGGAAGCGGAAAAGGAGGAAAAATTAGGAGAAAAGTTGAGGAGAGGGGTTTTGGTAGGGAAAAGCAGGGGACCCTCTACTCCATTTCCTTCTTGGCTCTCCCTTACTCACACTAACAAACACATTCGGGACCATTCTGTTTCCGCTAGGAAGCTCGCCGCAGCGCTCTGGGAATTCAATCAATCTTTCCCACTCTTTCAAATGCATCGTTCTGCTGCTAATAACGCTCAGCCTTCTGCCGCCGCCGCCGTCGCTCCCGATCCCAGACATCGCCGCCACCATTACATCCTCCATAAGGACAAGGCTCTCCACATCTCCAACTTCCTGGCCGATGCATCTCCCAGTTCCCCTGATCAGGTGCCTGTGAAGTCATGCACTGTCTTTAACCTCGTGCCTGTAATGGAGGTAGAGATTCTCATAGACATTGTTAACGATTCCATAGAGACAAATCTAGATGTCCCAGCTAGCGCCAGCAGTTTGAGGAGGCATATTGCTGCATCCTTGATGCAGCAGCATCGAGCAATCGAGAGAAATAATCATGCACTGCAACCTTTATCTCCTGCAAGTTATGGTAGTTCCATGGAGATGACACCCTATAATCCTGGAGCCACTCCTTCTAGTTCCTTGGAATTTAAGGGAAGGATTGGTGAGCCACATTATAGTCTCAAAACATCTACGGAGCTTCTGAAAGTGCTAAACAGAATATGGAGCCTGGAAGAACAACATGCTTCTAACGTTTCATTGATAAAAGCATTAAAATCAGAGCTAGATCATGCGCGTATAAGGATCAAAGAGTTGCTTCGAGACCGACAAGCAGATCGACATGAGGTTGATGACCTGATGAAGCAAATTGCAGAGGATAAATTGGTTCGGAAGAGTAAGGAACAGGATCGACTCCACGCTGCCGTGCAATCTGTGAGGGATGAACTCGAGGATGAGAGGAAATTAAGGAAACGGTCAGAGAGCATACACCGGAAATTAGCTCGAGATCTCTCTGAAGTGAAGTCCTCTCTTTCTAGCGCTCTAAAAGAATTGGATCAAGAGAGAACAAGAAGAAAGCTCTTGGAGGACCTCTGTGATGAATTTGCTAGGGGAATAAATGAATATGAACGAGAAGTGCATAGTCTGAATCACAAGTCTGATAAGGACTGGATTCAAAGGGCTGATCACGATCGTTTGATTCTTCACATATCTGAATCGTGGCTGGATGAACGTATGCAAATGCAGCTGGAAGCAGTTCAGAATGGTTTTATAGATAAGTCCATAGTTGACAAACTAAGCCTTGAAATAGAGACTTTTCTTAGAGCTAAACAAAATAGTCGAAGTACAGAAAATATAGTGGTAAGGAATCGCCGTAATTCCTTGGAATCTGTACCACTGAACGATGCTGTCAGTGCACCGCAGGTGGCGGGTGATGACGACGATTCCGTGGGAAGTGATTCAAATTGTTTTGAGTTGAACAAGCCAAGCAACAAGGGATCTAAGGTACACGAAGAAGAGGCTGTCGACAAACATTTTGAGGAGACATTGAAAACCAACCACACGAAGAAAAAACCAATACCACGAGAGGGGTTAAAACATCGTAGCCCATCTAGCTTGCAAGTGAAGTTTGAAGAACAGATGGCGTGGGCCATGTCATCTGATTCACATAAGAAGTCCCAGTCAATTGATGCAGATCAAGGGAAGACCACAGACACCAAGGCAGTTGAAGGAACTTTATCTGAAAAGTGCGAACACTTTGAGATTAACGAAGATGATGATTCTGAAAGAAAGATGAACCCCACTGAATTGCACAGCTCCAGTAAAAATCACATTATTGATAATCTGATAAGAGGTCAACTTATGGCATCTGAAGGTGGCAATATGCATGCTGAGAATAATTATAGCGAGGCTTCCTGCAGCAATGCTGGATGGAGGAATCAGGCAAGCCCTGTAAAGCAGTGGATGGCAAAACTTGGATCCAAAGACCTAGACATATCGGAGCCTTCCAAAGTGCCTTCAGGGTCAAAGGAGAACAATACTTTGAAGGCGAAGCTTCTTGAAGCTAGGTCCAAGGGGCAGCGATCGCGTTTAAAAGCCTTGAAAGGGAAGAGCGAAACGCAGACGGCGTCCCTGATGGCAGCGTCGTTCAGGTGGATATTACAACTACACAGGGATGTTCCAAAAGCCGCACGCTTCTACTCCGAAGGCTTGGACTTCACCATCAACGTCTGCTCTCTCCGTTGGGCCGAACTTCAATCTGGTTCTCTCAAGCTTGCCCTCATGCATTCTTCCCATGGTGAGCTGCTGATTCACTTTCAATTTCACAGTGACCAAGCCACCGCGCAGAAAGGGTACTCCTCCCTTTTGTCATTTACGGTGACCGACATGAACACTACAGTAAATAAATTAATGGCGTTAGGAGCTGAACTCGATGGGCCCATCAAATATGAGATCCATGGAAAGGTTGCAGCTATGCGGTGTATTGATGGACATGTCTTAGGCCTGTATGAACCTGTCTAA 2517 0.4581 MKSEEEEAEKEEKLGEKLRRGVLVGKSRGPSTPFPSWLSLTHTNKHIRDHSVSARKLAAALWEFNQSFPLFQMHRSAANNAQPSAAAAVAPDPRHRRHHYILHKDKALHISNFLADASPSSPDQVPVKSCTVFNLVPVMEVEILIDIVNDSIETNLDVPASASSLRRHIAASLMQQHRAIERNNHALQPLSPASYGSSMEMTPYNPGATPSSSLEFKGRIGEPHYSLKTSTELLKVLNRIWSLEEQHASNVSLIKALKSELDHARIRIKELLRDRQADRHEVDDLMKQIAEDKLVRKSKEQDRLHAAVQSVRDELEDERKLRKRSESIHRKLARDLSEVKSSLSSALKELDQERTRRKLLEDLCDEFARGINEYEREVHSLNHKSDKDWIQRADHDRLILHISESWLDERMQMQLEAVQNGFIDKSIVDKLSLEIETFLRAKQNSRSTENIVVRNRRNSLESVPLNDAVSAPQVAGDDDDSVGSDSNCFELNKPSNKGSKVHEEEAVDKHFEETLKTNHTKKKPIPREGLKHRSPSSLQVKFEEQMAWAMSSDSHKKSQSIDADQGKTTDTKAVEGTLSEKCEHFEINEDDDSERKMNPTELHSSSKNHIIDNLIRGQLMASEGGNMHAENNYSEASCSNAGWRNQASPVKQWMAKLGSKDLDISEPSKVPSGSKENNTLKAKLLEARSKGQRSRLKALKGKSETQTASLMAASFRWILQLHRDVPKAARFYSEGLDFTINVCSLRWAELQSGSLKLALMHSSHGELLIHFQFHSDQATAQKGYSSLLSFTVTDMNTTVNKLMALGAELDGPIKYEIHGKVAAMRCIDGHVLGLYEPV 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02409 838 MobiDBLite consensus disorder prediction 518 537 - -
Vimu7g02409 838 MobiDBLite consensus disorder prediction 549 603 - -
Vimu7g02409 838 Coils Coil 333 377 - -
Vimu7g02409 838 Gene3D - 721 838 IPR029068 -
Vimu7g02409 838 Coils Coil 1 21 - -
Vimu7g02409 838 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 710 837 IPR029068 -
Vimu7g02409 838 Coils Coil 254 288 - -
Vimu7g02409 838 MobiDBLite consensus disorder prediction 464 484 - -
Vimu7g02409 838 PANTHER GB|AAF24581.1 9 697 IPR043424 -
Vimu7g02409 838 MobiDBLite consensus disorder prediction 574 602 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02409 Vimu-Chr7 20637309 20642140 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02409 - - gmx:100814663 1087.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02409 7 20637309 20642140 Vimu7g02409 7 20637309 20642140 ECH