Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02408 ATGCGTAGCCGGGGATCGCAGAACCGGCTTTCTGGTAACTCTTTTGGATCACGTGTTTCTGCGCTCATGTTAGCCATGGTTGCTACCATGGCTACCATTTACGTTGCCGCCAGGCTATTTCAGGAAGCGGAAAGTAGGGCTTATTTAATCGAAGAGCTTGAAAAAATAACTGGTCAGGGTCAATCTGCCGTTTCTCTTGATGATACACTGAAAGTTATAGCCTGCAGGGAACAAAGTAAGAAGTTGTCTGTCCTTGAGAACGAACTAGCTGCGGCTAGCCAGGAAGGTTTTGTTCCAAAGCGCTTGCAAGGAAATAATGAGAAGCATCCTACAAAGAAAGCACTTTTAGTAGTTGGAGTGATGACAACCTTTGGTCGGAGAAAAAACCGAGATGCAATCCGTAAGGCTTGGATGCCAGCAGGTATAGCTAGGAGAGAACTGGTTGATACGAAAGGAATCGTTGTCCGATTTGTAATAGGAAGCAGTGCAAACGACGGAGACAGTTTGGACAAAGAAATTAAAGCAGAAAGCAGTCACACCAATGATTTCGTCATTCTTGATAATCAAGTGGAGGCCCCTGAAGAAAAAGCAAAAAAGATAAAATCATTCTTCATTTATGCAATAGGCAAATGGGATGCTGAATTTTATGCTAAGGTCAATGATGATGTCTATGTTAATCTCGATTCCCTTGGAGTAGTGCTAGCTTCTCATTTGGACAAGCCCCGTGTGTATATTGGTTGCATGAAATCAGGCAAAGTTTTCTCTGAGCAGACACATAAATGGCATGAGCCAGACTGGTGGAAATTTGGTGATGGACAATCATACTTTAGACATGCTTCAGGTGAGGTCTATGTCATTTCAAAATCATTGGCTCAGTTTATTTCAATAAACAGTTTTATGCTCCGTACATATGTACATGATGATGTAAGCATTGGATCTTGGTTTATTGGGCTTGATGTACAGCACATTGATGAAACAAAACTTTGCTGCTCCACCTGGTCCCCTGGGGCAATTTGTGTGGTAGTATGA 1029 0.4247 MRSRGSQNRLSGNSFGSRVSALMLAMVATMATIYVAARLFQEAESRAYLIEELEKITGQGQSAVSLDDTLKVIACREQSKKLSVLENELAAASQEGFVPKRLQGNNEKHPTKKALLVVGVMTTFGRRKNRDAIRKAWMPAGIARRELVDTKGIVVRFVIGSSANDGDSLDKEIKAESSHTNDFVILDNQVEAPEEKAKKIKSFFIYAIGKWDAEFYAKVNDDVYVNLDSLGVVLASHLDKPRVYIGCMKSGKVFSEQTHKWHEPDWWKFGDGQSYFRHASGEVYVISKSLAQFISINSFMLRTYVHDDVSIGSWFIGLDVQHIDETKLCCSTWSPGAICVVV 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02408 342 Coils Coil 75 95 - -
Vimu7g02408 342 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 86 322 IPR002659 GO:0006486|GO:0016020|GO:0016758
Vimu7g02408 342 Pfam Galactosyltransferase 129 324 IPR002659 GO:0006486|GO:0016020|GO:0016758
Vimu7g02408 342 Gene3D - 104 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02408 Vimu-Chr7 20624699 20628748 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g02408 22 342 Glycosyltransferase AT5G53340 59.190 6.60e-150 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02408 K20854 - gmx:100802753 578.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02408 7 20624699 20628748 Vimu7g02408 7 20624699 20628748 ECH