Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02398 ATGCCATCGGAGTGCCTCAACCTTATACCTCACAATAAGTTTTCGTTTGCAAAAATATGGCTTCTAGCAGCTCAATTTGAAATACGTCAACTGAATCTCAAGGCTGCTCGGCAAATATTAGGAAATGCCATTGGAAAGGCTCCTAAAGATAAGATTTTTAAGAAGTACATAGAAATAGAACTGCAACTCGGTAATATAGACCGGTGCAGAAAATTATATGAAAAATATCTGGAGTGGTCTCCAGAAAATTGTTATGCTTGGAGCAAGTATGCTGAGTTGGAGAGATCGTTATCCGAGACCGAACGAGCACGAGGAATTTTTGAGCTTGCAATTGCCCAACCAGCGTTGGACATGCCTGAGCTCTTGTGGAAGGTACAGAATTTATTTCTTGTGCCATGTCAAGACACTCACATTTATTTGTCTGACATCATTCTTGATCCAGCATCAGGATTTATTTAA 459 0.3987 MPSECLNLIPHNKFSFAKIWLLAAQFEIRQLNLKAARQILGNAIGKAPKDKIFKKYIEIELQLGNIDRCRKLYEKYLEWSPENCYAWSKYAELERSLSETERARGIFELAIAQPALDMPELLWKVQNLFLVPCQDTHIYLSDIILDPASGFI 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02398 152 PANTHER PRE-MRNA SPLICING FACTOR 4 124 IPR045075 GO:0000398
Vimu7g02398 152 Gene3D Tetratricopeptide repeat domain 3 130 IPR011990 GO:0005515
Vimu7g02398 152 SUPERFAMILY TPR-like 7 120 IPR011990 GO:0005515
Vimu7g02398 152 SMART hat_new_1 31 62 IPR003107 GO:0006396
Vimu7g02398 152 SMART hat_new_1 98 132 IPR003107 GO:0006396
Vimu7g02398 152 SMART hat_new_1 64 96 IPR003107 GO:0006396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02398 K12869 - pop:7458229 241.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02398 7 20572010 20573226 Vimu7g02398 7 20572010 20573226 ECH