Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02324 ATGGCTGCTTACATGGCACCTTCTTTGGATGCGAGGCAAGACATAGTGGTGGTAGAGGTGCCAAAGCTCGGGAAAGAGGCTGCAGTGAAGGCCATAAAGGAGTGGGGGCAGCCAAAGTCAAAGATTACACACTTGATCTTTTGCACCACCAGTGGTGTTGACATGCCTGGTGCTGATTACCAGCTCACTAAACTCCTCGGACTTCGCCCCTATGTGAAGAGGTACATGATGTACCAACAGGGGTGCTTTGCAGGAGGCACGGTTCTTCGATTGGCTAAGGATTTGGCCGAGAACAACAAGGGTGCCCGTGTGCTTGTCGTGTGTTCTGAGATCACTGCAGTCACCTTCCGTGGCCCAAGTGACACCCACTTAGACAGTCTTGTCGGACAGGCACTGTTTGGAGATGGAGCAGCTGCGGTGATAGTCGGTTCTGACCCAATTCCACAGGTTGAGAAGCCATTGTTTGAGCTGGTTTGGACTGCACAAACAATTGCTCCAGACAGTGAGGGTGCCATTGATGGGCACCTTCGTGAAGTTGGACTCACCTTTCACCTTCTTAAGGATGTTCCTGGGATTGTCTCAAAGAACATTGGGAAAGCACTTTTTGAGGCCTTCAACCCATTGAACATCTCTGATTACAACTCCATCTTCTGGATTGCACACCCTGGTGGACCTGCAATTCTTGACCAGGTTGAGCAAAAGTTGGGTCTGAAACCAGAAAAGATGAAGGCCACTAGAGATGTGCTTAGTGATTATGGAAACATGTCAAGTGCATGTGTGCTATTCATATTGGATGAGATGAGGAGGAAATCAGCTGAAAATGGACTTAAAACAACAGGTGAAGGACTTGAGTGGGGTGTCCTTTTTGGTTTTGGACCTGGACTTACCATCGAGACTGTTGTTCTCCATAGTGTGGAGATCTAA 924 0.4859 MAAYMAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIVGSDPIPQVEKPLFELVWTAQTIAPDSEGAIDGHLREVGLTFHLLKDVPGIVSKNIGKALFEAFNPLNISDYNSIFWIAHPGGPAILDQVEQKLGLKPEKMKATRDVLSDYGNMSSACVLFILDEMRRKSAENGLKTTGEGLEWGVLFGFGPGLTIETVVLHSVEI 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02324 307 SUPERFAMILY Thiolase-like 3 151 IPR016039 GO:0016746
Vimu7g02324 307 FunFam Chalcone synthase 2 1 153 - -
Vimu7g02324 307 Gene3D - 154 307 IPR016039 GO:0016746
Vimu7g02324 307 Pfam Chalcone and stilbene synthases, C-terminal domain 156 305 IPR012328 -
Vimu7g02324 307 FunFam Chalcone synthase 1 154 306 - -
Vimu7g02324 307 SUPERFAMILY Thiolase-like 153 304 IPR016039 GO:0016746
Vimu7g02324 307 CDD CHS_like 5 302 - -
Vimu7g02324 307 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 1 305 IPR011141 GO:0009058|GO:0016747
Vimu7g02324 307 Gene3D - 1 153 IPR016039 GO:0016746
Vimu7g02324 307 Pfam Chalcone and stilbene synthases, N-terminal domain 2 146 IPR001099 -
Vimu7g02324 307 ProSitePatterns Chalcone and stilbene synthases active site. 74 90 IPR018088 GO:0009058|GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02324 Vimu-Chr7 20027184 20028107 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g02324 68 301 Miscellaneous Gene Families AT3G52160 30.290 2.27e-13 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02324 K00660 - gmx:100782897 599.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02324 7 20027184 20028107 Vimu7g02324 7 20027184 20028107 ECH