Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02189 ATGTCTACTCATACATACCCATCATCATACAAGCACAGAAACACAGAAGAAACACAGAGCATCTTCGTCTCTTCCATTCCAATGGCAGTGCCAATGGCAACTCTTTCTGCTCTTTCATCCACTGCTCTTCTCAACACCAATACAAGCATAAACACCAGCAGCAGGACCATCTGCACTTTCCCACTACATTCCAACATCCACACCCGTCTCTCTTTTTCTTTCTGCTCCAAACGCACTTCCCTCACCTGCGCCGGCTCCTCCGTCAAAGACGACCAACAAACTGACTCCTCCTCTACTACCACGGTTTCCGTTGCTCCTAAAAACGACGTGGACCATGATTCTGGTTCTCTGTCTGATTCTGATTCCGATTCTGACACCCAACAGGAAATGGACTGGAAGACCGACGAGGAGTTTAAGAAGTTCATGGGCAACCCTTCCATCGAGGCCGCCATAAAGCTTGAGAAGAAGAGGGCTGATAGAAAGCTCAAGCAACTTGACAGGGAAACCACCAACTCTAACCCCCTTTTGGGCCTTTTCAACACCTTAGTTCGTGACAACTTGCTCAGGGAAAAGGAGATGCTGCAAAAGGCGGAGGAAACTTTCAAGGCTCTTGATCTTAACCAGTTAAAGAGTTGCTTTGGGTTTGACACCTTCTTTGCAACCGATGTTCGAAGATTTGGAGATGGAGGCATTTTCATTGGCAATTTAAGGAAACCCATCGATGAGGTCATTCCCAAGTTGGAGAAAAAACTCTCCGATGCAGCAGGACGAGATGTCGTCGTCTGGTTCATGGAAGAAAAAGCAAATGACATTACCAAACAGGCTTGTGTGGTGCAACCCAAAGCAGAAATGGATCTCCAATTTGAGTCAACTAAGCTGAGTACTCCTTTGGGCTATTTTAGTGCAATTTTATTAGCTGTTACTACCTTTGGAACAGTTGCTCTGATGAGTGGCTTCTTCCTTAAACCCGATGCTACAGTTGATGACTATCTGGCTAATGTTGTGCCTCTATTTGGTGGCTTCTTGTTTATTCTGGGAGTTTCAGAGATAACTACCAGGGTAACAGCAGCACGTTACGGTGTTAAGCTTAGCCCTTCCTTCCTGGTGCCATCAAATTGGACAGGCTGCTTGGGAGTGATGAACAATTATGAATCTCTCCTCCCAAACAAGAAAGCTCTTTTTGACATTCCTGTAGCCCGTACTGCTAGTGCATATTTAACTTCACTACTGCTTGCTATTGCTGCGTTTGTAGCTGATGGAAGCTTTAATGGGGGTGATAATGCATTGTACATACGGCCTCAATTTTTCTATAACAACCCTTTGCTTTCTTTCATCCAATACGTTATTGGACCTTACACAGACGATCTTGGAAATGTACTACCTTATGCCGTGGAAGGTGTTGGAGTTCCTGTTGATCCGCTTGCATTTGCTGGGCTTTTAGATGACCACCATTGTCTTTTTTACAAGTTTTGCCTTGACAAATTTGAGCCTTTGCGTTGGCTCGAAGTTACAGTTGAATCAATGGCTAGACAATTTGAATTTGATGATTATGCAGGGATGGTGGTGACTTCTTTGAACTTGTTGCCATGTGGGAGGCTAGAAGGAGGACGCATTGCTCAAGCCATGTTTGGAAGAAACACTGCCACTCTCTTATCTTTTGCCACTTCACTGTTACTCGGTATTGGTGGCCTCAGTGGCAGTGTTCTGTGCTTGGCATGGGGATTGTTTGCAACCTTCTTTCGGGGTGGAGAGGAAATACCCGCAAAAGACGAGATCACCCCTCTAGGAGAAAGCAGATACGCTTGGGGCGTCATCCTTGGCCTCATCTGTTTCCTCACACTTTTCCCCAATGGCGGAGGCACATTCTCCTCTTCATTCCTCAGTGGTCCATTTTTCAGGGTGACGGTTAAATCTGGTGGTCTCCCATTATTTGGTTCTCTTACCCTTAATTCTGACCTTCCTGCATACCCGATTGTCCTCTACACTCGCCACGCTTCATTTCCTAGTCAACGCGTCTCCAACTTCTCTCTATTTAAGAGTGGCAGGACTTTGGTCCATGATCCTCGCAAGTGGATGCATACAAGGAGCGACGACGAGGACGATGAAAACGATGAGGATCGGAGTCTGGATCTACTGGTGAGGTTCGTTCAGAGTGTCTTCAAGAAGGTGTCAAAGAGAACAAGGAAAGCAGTTCGATCCGTTCTCCCTTTCCCCATCTCCACCCATTTGGTCGGATTTTCTGTGAATGGGACACTGTTGCTGACCTTCCTGTGGATTTTGAAGGCGTTTCTTCAGGCTACTGCTGTGCAAAGCAGCATACAACATGAGAACTCAGTAACGATGGGATCCAGGTACAGAGGGGTTGTCCTAGTCCACGGGGTTCCTATAGTATACGTTAAACATTTAGGTATTGATGTATATAATTCAACGCAGGTGTTATGCACGCTTGGAAGTGTAGTGTTTGTAAGCATCTTATTAATCCGTGGGATATGGTCTGGTATTAGCTTTTTGCAAGAAAGCCGACACCAAAAAATGGATCAACTAGATATGCGCAATGCTTGGAATAATGGTGCACAGCCCGTGACTTGA 2589 0.4577 MSTHTYPSSYKHRNTEETQSIFVSSIPMAVPMATLSALSSTALLNTNTSINTSSRTICTFPLHSNIHTRLSFSFCSKRTSLTCAGSSVKDDQQTDSSSTTTVSVAPKNDVDHDSGSLSDSDSDSDTQQEMDWKTDEEFKKFMGNPSIEAAIKLEKKRADRKLKQLDRETTNSNPLLGLFNTLVRDNLLREKEMLQKAEETFKALDLNQLKSCFGFDTFFATDVRRFGDGGIFIGNLRKPIDEVIPKLEKKLSDAAGRDVVVWFMEEKANDITKQACVVQPKAEMDLQFESTKLSTPLGYFSAILLAVTTFGTVALMSGFFLKPDATVDDYLANVVPLFGGFLFILGVSEITTRVTAARYGVKLSPSFLVPSNWTGCLGVMNNYESLLPNKKALFDIPVARTASAYLTSLLLAIAAFVADGSFNGGDNALYIRPQFFYNNPLLSFIQYVIGPYTDDLGNVLPYAVEGVGVPVDPLAFAGLLDDHHCLFYKFCLDKFEPLRWLEVTVESMARQFEFDDYAGMVVTSLNLLPCGRLEGGRIAQAMFGRNTATLLSFATSLLLGIGGLSGSVLCLAWGLFATFFRGGEEIPAKDEITPLGESRYAWGVILGLICFLTLFPNGGGTFSSSFLSGPFFRVTVKSGGLPLFGSLTLNSDLPAYPIVLYTRHASFPSQRVSNFSLFKSGRTLVHDPRKWMHTRSDDEDDENDEDRSLDLLVRFVQSVFKKVSKRTRKAVRSVLPFPISTHLVGFSVNGTLLLTFLWILKAFLQATAVQSSIQHENSVTMGSRYRGVVLVHGVPIVYVKHLGIDVYNSTQVLCTLGSVVFVSILLIRGIWSGISFLQESRHQKMDQLDMRNAWNNGAQPVT 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02189 862 MobiDBLite consensus disorder prediction 85 130 - -
Vimu7g02189 862 PANTHER ZINC METALLOPROTEASE EGY1 60 480 IPR044838 -
Vimu7g02189 862 Coils Coil 148 168 - -
Vimu7g02189 862 Coils Coil 187 207 - -
Vimu7g02189 862 MobiDBLite consensus disorder prediction 85 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02189 Vimu-Chr7 19261301 19266592 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02189 K25380 - gmx:100818502 862.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02189 7 19261301 19266592 Vimu7g02189 7 19261301 19266592 ECH