Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02168 ATGTATGGGTCTGAATCCGGATGGGTGGAGGCTCGATCTTCGTGCGATCATCTAGCCTCCTTGTCCGCCGATCTCAGCCACATTCCGCCTCCCGGCACACCCTGCCACACCTGCCAACACCCCTCCGAAAACTGGCTCTGCCTCTCCTGCAAGCAGGTCCTCTGTGGCCGTTTCGTCAACAAGCACATGCTCCACCACTTCCACCACACTAATCACTCTATCGCCCTCAGTTTCAGTGATCTCTCCTTCTGGTGTTTCTCCTGCGACGCTTACTTGGATGCCCAACTCATTCCCCAACTGCGCCCTGTTCATCAACTAGCTTACATTATCAAATTCGGCGAGTCTCCACCACTCCCTCTCATTCAACATCAACCTTCCACTGCCACCTCCGATTAG 396 0.5455 MYGSESGWVEARSSCDHLASLSADLSHIPPPGTPCHTCQHPSENWLCLSCKQVLCGRFVNKHMLHHFHHTNHSIALSFSDLSFWCFSCDAYLDAQLIPQLRPVHQLAYIIKFGESPPLPLIQHQPSTATSD 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02168 131 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 9 116 IPR013083 -
Vimu7g02168 131 ProSiteProfiles Zinc finger UBP-type profile. 13 114 IPR001607 GO:0008270
Vimu7g02168 131 Pfam Zn-finger in ubiquitin-hydrolases and other protein 35 93 IPR001607 GO:0008270
Vimu7g02168 131 SUPERFAMILY RING/U-box 13 103 - -
Vimu7g02168 131 SMART Zf_UBP_1 34 83 IPR001607 GO:0008270
Vimu7g02168 131 PANTHER HISTONE DEACETYLASE-LIKE PROTEIN 1 129 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02168 - - aprc:113869857 226.868
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02168 7 19168506 19170192 Vimu7g02168 7 19168506 19170192 ECH