Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02167 ATGGGTGAAGAGGCCACCAAATCCAATCCGAAGCTAACCCTGTTGCCTCTCATAGCTCTGATATTCTATGAAGTATCAGGTGGTCCTTTTGGAGTAGAAGATTCCGTGAGGGGAGGGGGTGGTCCTCTTTTCGCGTTAATCGGATTCTTCGTTTTCCCTTTAATCTGGAGTATACCAGAAGCTCTTGTTACGGCTGAACTTGCCACCACCTTCCCTCAAAACGGTGGATATGTTATCTGGATTTCCTCAGCCTTTGGACCCTTTTGGGGCTTTCAGGAAGGCTTTTGGAAATGGTTCAGCGGGGTCATGGACAATGCTCTTTACCCTGTTTTGTTCCTCGATTACATAAAGCAATCATTGCCTCTCTTTGACCGATTCACTGCCCGAATCCCTGCTCTCTTAGTCATCACATTTTCACTAACTTACTTCAATTACCGTGGCCTTCACATTGTTGGCTTTTCTGCTGTTCTGCTTGCGCTGTTCTCACTTTTCCCATTTCTCATAATGGCCCTTCTTTCCATTCCATTAATAAGACCACGGCGGTGGCTTGCTGTGGATTTTGGCAAGGTGGAGTGGGGAAGATACTTCAATAGTATGTTCTGGAATTTAAACTACTGGGATAAGGCAAGTACCCTTGCAGGGGAGGTTGAAAATCCAAGTAAAACGTTCCCAAAAGCACTTATTGGAGGACTAGTCTTGGTGGTCTCCTCGTATTTGATCCCACTCCTTGCGGGAACAGGTGCTTTGGAGTCCTCGCCAAGTGAGTGGGCAGATGGCTATTTTGCACAGGTGGGGATGTTCATTGGTGGTTCTTGGCTCAAACTCTGGATTCAACTGGCTGCTGCTATGTCTAACCTCGGCTTGTTTCAAGCAGAAATGAGCAGTGATGCTTTTCAACTTCAAGGGATGAGCAAAATGGGAATGCTTCCAGCTCTATTTGCTTCAAGGTCTAAGTATGGAACGCCCACGGTTAGCATTTTGTTCTCTGCCACTGGAGTTATCTTCCTGTCGTGGATGAGCTTTCAGGAAATCATAGAGTCCCTCAATTTCTTATATGCCGTAGGAATGCTTCTCGAGTTTGCAGCTTTTATTACTCTGAGGTTGAACAAGCCAAATCTTTACAGACCTTACAGAGTTCCGTTGCCAACATTTTGGGCGGCTATGTTATGTCTGCCTCCTGCTTTATTGCTTATTCTTGTAATGTGTTTGGCTTCTTCAAGAACTTTCTTTGTGAGTGGAGCTGTAATTCTCCTGGGGTTCATCCTGTACCCTATCTTAGTTCAAGCCAAAAATAAAAACTGGATTCTGTTTGAAGAAGACTCAGCTACCTTGCATTCCTCTGGCTGGCAGCAATGCCACTCAGTTGTTTCAGAACTGACTGACCTCGACCAAGAAAATAAGGGTGTTGAGCTTCTTGTGACCTCACCATTTGCTAGTGGGGAAGAAGAGTTGTGTTTAGTGCAAAGCGATTCTAAAGTCTAA 1482 0.4521 MGEEATKSNPKLTLLPLIALIFYEVSGGPFGVEDSVRGGGGPLFALIGFFVFPLIWSIPEALVTAELATTFPQNGGYVIWISSAFGPFWGFQEGFWKWFSGVMDNALYPVLFLDYIKQSLPLFDRFTARIPALLVITFSLTYFNYRGLHIVGFSAVLLALFSLFPFLIMALLSIPLIRPRRWLAVDFGKVEWGRYFNSMFWNLNYWDKASTLAGEVENPSKTFPKALIGGLVLVVSSYLIPLLAGTGALESSPSEWADGYFAQVGMFIGGSWLKLWIQLAAAMSNLGLFQAEMSSDAFQLQGMSKMGMLPALFASRSKYGTPTVSILFSATGVIFLSWMSFQEIIESLNFLYAVGMLLEFAAFITLRLNKPNLYRPYRVPLPTFWAAMLCLPPALLLILVMCLASSRTFFVSGAVILLGFILYPILVQAKNKNWILFEEDSATLHSSGWQQCHSVVSELTDLDQENKGVELLVTSPFASGEEELCLVQSDSKV 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02167 493 FunFam Amino acid permease, putative 8 438 - -
Vimu7g02167 493 PANTHER POLYAMINE TRANSPORTER PUT1 4 447 IPR044566 GO:0022857
Vimu7g02167 493 PIRSF AA_transporter 1 443 - -
Vimu7g02167 493 Gene3D Amino acid/polyamine transporter I 9 448 - -
Vimu7g02167 493 Pfam Amino acid permease 15 412 IPR002293 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02167 Vimu-Chr7 19165544 19167182 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g02167 1 466 Organic Solute Cotransporters AT3G19553 72.537 0.0 662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02167 - - vun:114172952 917.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02167 7 19165544 19167182 Vimu7g02167 7 19165544 19167182 ECH