Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02146 ATGGGTGAGAGTGGGGACGAGGCTCTAACGCCGGCGGGAAGGCTTTTCCTGCAGGAAGAAACGAAGCAAGTGATCAACTGCGTGATAGGGCTGAAGAATCCCATCGATGTGGAGTTAGTGAAATCGGAAGTGCGGAAGTCAACCATGCTCCAACACCCGCGCTTCAGCAGCCTGCTGGTGAGAGACGAAAGAGGAGTGGAGCACTGGCGAGCCACCCAAGTGGAGATTGATCGGCACTTCCGCATAATCGAGGAGGCGCTGTGTGAGGAAGGGGATGAACGGGCCATCAACGGCTACCTTGCGGAACTATCAATAGACCGCGATGGGCTTAGCATGGATAAGCCCCTCTGGGAAATCCATCTTCTCATGGCCCACAACTGCCTTATTTTCCGAATCCATCACGCTCTTGGTGATGGTATTTCCTTGATGTCTATGTTCCTCGCCAGCTGCAGGAAACTCAACGATCCCCAAGCTCTCCCTGCCATCGCTTCTCCTTCAAATATCTCCTACCCTCCCTTCAATTTCTGGAATCTCCTCGTCACTCTCTGGTTTTCTTTCCTCTTTGTCCTCGACTTTATCCTCAGGTGTTTCTGGGTTCGTGACCCCAGATCCTCCATCACCGGTGGCGCCGGCGTTGAACTCTGGCCCCGCAAAATTGCCACTGCCACTTTCTCCCTTCAAGACATGAAGACCGTCAAGACTGCCGTTAATGCGACCATAAATGACGTTCTATTTGCAGTTATATCGTGTGGGATATCTAGATACTTGGACTTCCGAGCACCTAACGGGCTGCGAGACGGTGTTCAACTGACAGGGTTAGCTATGGTTAATTTAAGAAAGCAACCAGGGTTGCAGGAATTGTCCAATTTGATGAAAAGGAATTCAGGAGCGAGGTGGGGTAACAAATTTGGTATGATTCTGCTGCCAATATATTACCAGAGAAGCAACTTTTCAGATCCTTTAGAATATTTGAAGAGAGCTAAGGCAACGATTGACAGAAAGAAACGATCTCTAGAGGCCAGTTTCTCATACAAAATTGGAGATTTTGTAATGTCCACCCTTGGTCCAAAGTTTGCTGGCCTTCTAAATTACCGGATACTCTGCCACACCACCTTTACAATCTCAAACGTGGTAGGTCCACAAGAAGAAATTATGATTGGAGGCAATCCTATAACGTTTTTAAGGGCAAACAATTCTGCCTTGCCACATGCGCTGATTTTGAATATGGTGAGCTATGCTGGAAGGGCAGATATGCAAGTGCAGGTGGCCAAAGACATCATTCCCGATCCTGAGTTTCTTGCCAAGTGCTTTGAAGATGCATTGCTTGAAATGAAGGAGCAGGTTACGGCCAAAATCTGA 1359 0.4834 MGESGDEALTPAGRLFLQEETKQVINCVIGLKNPIDVELVKSEVRKSTMLQHPRFSSLLVRDERGVEHWRATQVEIDRHFRIIEEALCEEGDERAINGYLAELSIDRDGLSMDKPLWEIHLLMAHNCLIFRIHHALGDGISLMSMFLASCRKLNDPQALPAIASPSNISYPPFNFWNLLVTLWFSFLFVLDFILRCFWVRDPRSSITGGAGVELWPRKIATATFSLQDMKTVKTAVNATINDVLFAVISCGISRYLDFRAPNGLRDGVQLTGLAMVNLRKQPGLQELSNLMKRNSGARWGNKFGMILLPIYYQRSNFSDPLEYLKRAKATIDRKKRSLEASFSYKIGDFVMSTLGPKFAGLLNYRILCHTTFTISNVVGPQEEIMIGGNPITFLRANNSALPHALILNMVSYAGRADMQVQVAKDIIPDPEFLAKCFEDALLEMKEQVTAKI 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02146 452 Pfam Wax ester synthase-like Acyl-CoA acyltransferase domain 52 164 IPR004255 GO:0004144|GO:0045017
Vimu7g02146 452 PANTHER O-ACYLTRANSFERASE (WSD1-LIKE) FAMILY PROTEIN 6 450 IPR045034 GO:0008374|GO:0045017
Vimu7g02146 452 Pfam WS/DGAT C-terminal domain 299 445 IPR009721 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02146 Vimu-Chr7 19069823 19073406 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g02146 6 448 Acyl Lipid Metabolism Gene Families AT5G53390 35.684 9.28e-86 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02146 - - vum:124821758 887.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02146 7 19069823 19073406 Vimu7g02146 7 19069823 19073406 ECH