Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02118 ATGGCGATGGTGGACCAGCCTCTGTATCCATTTGCCGTATTGATCGATGAGCTGAAGAACGAGGATATTCAGCTGCGGCTGAACTCGATCCGACGGCTCTCGACGATCGCGCGGGCGCTCGGCGAGGAGCGAACGCGGAAGGAGCTGATTCCGTTTCTCAACGAGAACAACGACGATGACGATGAAGTGCTTCTCGCAATGGCTGAAGAATTGGGCGTGTTCATTCCCTACGTGGGAGGCGTTGAACACTCCAACGTGCTTCTTCCTCCGTTGGAGACGCTATGCACCGTTGAGGAAACTTGCGTCAGAGACAAATCGGTGGAGTCGCTGTGTAGGATTGGGGCTCAGATGAAGGAGCAGGATTTGGTTGAACACTTCATTCCTTTAGTTAAGGTAGTACATATAGATAGTTGCACTGCGTTTTTATTCATCATTTTAGGTTTTGTTTGTATAAACTTCATCGTTAAGTTCTTTGGAGTGAGTTTTCCATAA 492 0.4878 MAMVDQPLYPFAVLIDELKNEDIQLRLNSIRRLSTIARALGEERTRKELIPFLNENNDDDDEVLLAMAEELGVFIPYVGGVEHSNVLLPPLETLCTVEETCVRDKSVESLCRIGAQMKEQDLVEHFIPLVKVVHIDSCTAFLFIILGFVCINFIVKFFGVSFP 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02118 163 Gene3D - 2 139 IPR011989 -
Vimu7g02118 163 ProSiteProfiles HEAT repeat profile. 10 48 IPR021133 -
Vimu7g02118 163 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A 65 KDA REGULATORY SUBUNIT 4 131 - -
Vimu7g02118 163 SUPERFAMILY ARM repeat 8 131 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02118 Vimu-Chr7 18848188 18848679 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02118 K03456 - gmx:100799440 240.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02118 7 18848188 18848679 Vimu7g02118 7 18848188 18848679 ECH