Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01735 ATGGACATAGACCAGTTGCCCAAGAACGCTGCTAACTACACTGCGTTAACGCCGTTGTGGTTTCTCGAAAGAGCAGCTACGGTGCATCCTACCAGAAACTCCCTCATCCATGGATCTCGTCGCTACACGTGGCAACAAACCTACCACCGTTGCCGTCGATTTGCCTCCGCTCTTTCCAACTACTCCATCGGACCAGGAAACACTGTACTTTCTTTCTCTCTTTCTCTTTCTCTTTCCTTTCTCCTCTCGATGACTTGGGTAGCAGTTATTGCACCGAATATTCCAGCTCTTTATGAAGCTCATTTTGGGATTCCAATGGCAGGGGCTGTCTTGAATCCTGTTAATATTAGACTAAATGCATCGACAGTAGCCTTTCTTCTTGGTCATTGCTCAGCTGCAGCTGTAATAGTTGATCAAGAGTCCTTTTCTTTGGCAGAAGAAGCTTTGAAGATATGGTCTGAGAAAGCCAAAACTTTCAGGCCTCCACTTCTAGTAGTCATTGGTGATGAAAATTGCGACCCTAAGTCACTTAACTATGCTGTAGGCAAAGGAGCCATTGAATATGAGGATTTTCTTCAGGGTGGTGATCCTGAATATGCATGGAAACCCCCTGAGGATGAGTGGCAGAGTATTTCTTTAGGATACACATCTGGTACCACAGCTAGTCCGAAGGGTGTGGTATTACATCACCGTGGAGCCTATCTCATGTCTCTGAGTGGAGCTCTTATTTGGGGAATGACTGACGGTGCTGTGTATCTTTGGACACTCCCCATGTTTCATTGCAATGGTTGGTGTTACACTTGGACACTTGCAGCTATTTTTGGTACCAACATATGCCTTCGCCAGGTAACAGCGAAGGCAGTCTACGAAGCCATTGCCAAGTATAAAGTGACTCATTTTTGTGCAGCACCAGTGGTTCTTAACACAATAATCAATGCCCCACCTGAGGAAACCATACTTCCTCTCCCGCATGTTGTGCATGTGAATACAGCTGGGGCTGCTCCTCCTCCTTCTGTTCTTTCTGGAATGTCTGAACGAGGATTTCGTGTCACACACACTTATGGTCTCTCTGAAACCTATGGCCCCTCCGTCTATTGTGCCTGGAAACCAGAATGGGAATCACTTCCTCCTGAACGCCAAGCCCAGCTCAATGCAAGACAAGGGGTTAGGTACATTGGCTTGGAAAACTTGGAAGTGGTGAACACAAAAACCATGCAACCTGTTCCTGCTGATGGCAAAACTGTAGGTGAGATTGTGATGAGGGGCAATTCTGTGATGAAAGGGTACTTAAAGAACCCTAAAGCTAATGAGGAGACCTTTGCAAATGGATGGTTTCATTCTGGGGATCTTGCTGTGAAACATCCGGATGGGTATATAGAAATTAAAGACAGATCAAAGGACATCATCATCTCTGGTGCTGAAAATATCAGCAGTGTGGAGGTAGAGAACTCTCTTTACTCGCATCCTGCAATACTGGAAGCAGCAGTGGTTGCAAGGGCAGATGAGAAATGGGGTGAGTCTCCTTGTGCTTTTGTCACATTAAAGCCAGGAGTAGATGATAGTAACCAACAACGTATAGCTGAGGATATATTAAGGTTCTGCAAGGCAAAGATGCCTGCTTATTGGGTTCCAAAATCCTTTGTGTTTGGACCCTTACCTAAGACGGCTACTGGGAAGATACAGAAGCACTTACTAAGGGCCAAGGCAAAAGAGATGGGACCTGTTAAGATAAGCAAGTTATAA 1743 0.4561 MDIDQLPKNAANYTALTPLWFLERAATVHPTRNSLIHGSRRYTWQQTYHRCRRFASALSNYSIGPGNTVLSFSLSLSLSFLLSMTWVAVIAPNIPALYEAHFGIPMAGAVLNPVNIRLNASTVAFLLGHCSAAAVIVDQESFSLAEEALKIWSEKAKTFRPPLLVVIGDENCDPKSLNYAVGKGAIEYEDFLQGGDPEYAWKPPEDEWQSISLGYTSGTTASPKGVVLHHRGAYLMSLSGALIWGMTDGAVYLWTLPMFHCNGWCYTWTLAAIFGTNICLRQVTAKAVYEAIAKYKVTHFCAAPVVLNTIINAPPEETILPLPHVVHVNTAGAAPPPSVLSGMSERGFRVTHTYGLSETYGPSVYCAWKPEWESLPPERQAQLNARQGVRYIGLENLEVVNTKTMQPVPADGKTVGEIVMRGNSVMKGYLKNPKANEETFANGWFHSGDLAVKHPDGYIEIKDRSKDIIISGAENISSVEVENSLYSHPAILEAAVVARADEKWGESPCAFVTLKPGVDDSNQQRIAEDILRFCKAKMPAYWVPKSFVFGPLPKTATGKIQKHLLRAKAKEMGPVKISKL 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01735 580 Pfam AMP-binding enzyme C-terminal domain 480 559 IPR025110 -
Vimu7g01735 580 PANTHER ACYL-ACTIVATING ENZYME 6 575 - -
Vimu7g01735 580 Pfam AMP-binding enzyme 22 471 IPR000873 -
Vimu7g01735 580 CDD ttLC_FACS_AEE21_like 13 567 - -
Vimu7g01735 580 Gene3D - 467 575 IPR045851 -
Vimu7g01735 580 FunFam Long-chain-fatty-acid--CoA ligase FadD 71 466 - -
Vimu7g01735 580 SUPERFAMILY Acetyl-CoA synthetase-like 10 571 - -
Vimu7g01735 580 Gene3D - 3 466 IPR042099 -
Vimu7g01735 580 FunFam 2,3-dihydroxybenzoate-AMP ligase 466 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01735 Vimu-Chr7 16016548 16021078 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g01735 2 580 Miscellaneous Gene Families AT3G16910 73.103 0.0 902
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01735 K01913 - gmx:100808187 1076.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01735 7 16016548 16021078 Vimu7g01735 7 16016548 16021078 ECH