Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01696 ATGACTGGCTTGGGAGGCCCCATAGATGGTCGTTTTCAAGTTCAGTCTATGCCATCAATGTCACAACAGAATTTCAATCAGCCAATGCCACAAATTCCACCACAGAATCAACAAATATCACCCTTGCAGAAACCTATTCAATCATCACAGGAGTTGCCATCATCCCATCAGTTGTACCCTCAAGCACCAGTTCCCTACCCACAAACATCTGTTAGACAGCATGGCCAGCCACATCTTCCTCCTTCTGCTGGTCCTCTTCAATCTCAGCAGATACATGGAGTAAGTGGACAGTTTCCAACTTCTCAACCGCAAACTCAACCAAATGCTATGTCTGCTGCATTTCCTCAGGCTCCTCTTGACACCAGCATGCAATCTAATACTGCATTAGCTACAAATCAACAGCAAGTTCCTCCCTCCGTGCCACAACAGCCTATTCAGCAATCCCCTTCTCCCTTAGCCCAGATGCTGTCGCAACAGACACAGACTTTGCAAGCAAGCTTTCATTCATCTCAGCAGGCCTTCTCCCAGCTTCAACAACAACTGCAGATGATGCAGCCTTCTAGTCAAGCATTATCATTGCAGCAAAATGCAGAAGCTACTAAAAAGCATTCTCAATGGGTTGGGACTGTAGCACAACCAGTGGCCAGTACTCATGCAACTGCACCTGCTGCAGACGCCCCTTCATCCAAACTTGCTACTTCAGCCTTACCAGCAATAAACCATAACTCGGCTCTTGCCAAATGTAATTGGACAGAACATATATCTCCTGAGGGCTTCAAGTACTACTATAATAGTGTCACTGGTGAAAGTCGGTGGGAGAAACCTGAGGAGTTGACGTTATATGAACAGCAACAGCAAAGGGTATCTGTTCAGCAGTCTCACACTCAGTCACAACCTTCGGCACTACCTGCCCAGCAAATTCCACAGTTCCAACAGGTTCAGCCTCAGAGTCATCTCCAAGGACAAGTTCTTCACCAGCAACAAGCACAACAGCCTCCTTTGTCCTCTTCATTCCAGCCATATGGCGTTACAGGCCCTCAAAATGTTCAGGATGTTGGTTATAAACAGTTACAGCCAACTGTTATTTCAGCTGGTGATCCAGGACGTTACTCACAGGGTGTTCATTCTACACAAGAATTGATGTGGAAAAATAAGCCTTCAGGTACATGA 1170 0.4632 MTGLGGPIDGRFQVQSMPSMSQQNFNQPMPQIPPQNQQISPLQKPIQSSQELPSSHQLYPQAPVPYPQTSVRQHGQPHLPPSAGPLQSQQIHGVSGQFPTSQPQTQPNAMSAAFPQAPLDTSMQSNTALATNQQQVPPSVPQQPIQQSPSPLAQMLSQQTQTLQASFHSSQQAFSQLQQQLQMMQPSSQALSLQQNAEATKKHSQWVGTVAQPVASTHATAPAADAPSSKLATSALPAINHNSALAKCNWTEHISPEGFKYYYNSVTGESRWEKPEELTLYEQQQQRVSVQQSHTQSQPSALPAQQIPQFQQVQPQSHLQGQVLHQQQAQQPPLSSSFQPYGVTGPQNVQDVGYKQLQPTVISAGDPGRYSQGVHSTQELMWKNKPSGT 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01696 389 ProSiteProfiles WW/rsp5/WWP domain profile. 250 277 IPR001202 GO:0005515
Vimu7g01696 389 Pfam WW domain 249 275 IPR001202 GO:0005515
Vimu7g01696 389 MobiDBLite consensus disorder prediction 310 389 - -
Vimu7g01696 389 MobiDBLite consensus disorder prediction 310 357 - -
Vimu7g01696 389 SUPERFAMILY WW domain 249 282 IPR036020 GO:0005515
Vimu7g01696 389 MobiDBLite consensus disorder prediction 1 110 - -
Vimu7g01696 389 MobiDBLite consensus disorder prediction 130 154 - -
Vimu7g01696 389 CDD WW 247 277 IPR001202 GO:0005515
Vimu7g01696 389 Gene3D - 243 292 - -
Vimu7g01696 389 ProSitePatterns WW/rsp5/WWP domain signature. 250 275 IPR001202 GO:0005515
Vimu7g01696 389 MobiDBLite consensus disorder prediction 370 389 - -
Vimu7g01696 389 MobiDBLite consensus disorder prediction 14 110 - -
Vimu7g01696 389 SMART ww_5 245 277 IPR001202 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01696 Vimu-Chr7 15683980 15685948 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01696 - - gmx:100798390 475.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01696 7 15683980 15685948 Vimu7g01696 7 15683980 15685948 ECH