Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01693 ATGAACGTCGATAACGGTTCAGAGAGCGCGAAACTTGACAACTCGTCTATGCAAATTGACTCCGATGAATCTTCCGATCAAGTAAAAGACAATGAAAAGGAAAAGGAAGAACTCACCGAGACTATGAACAAGATGCATATTGAAGGATCTTCTTCTGGGAATGGATTTCCTAACTTTCGAAGAAAACCTGTCATCATTATTGTTGTAGGAATGGCAGGGAGTGGGAAAACGACACTCATGCATAGGTTGGTTGCCCATACACATATAAAAAACATCCGGGGTTATGTGATGAATCTTGACCCTGCCGTCATGACCCTCCCATATGCTTCTAACATCGATATAAGAGACACTGTCAAATACAAAGAAGTCATGAAGCAGTTTAACCTTGGCCCTAATGGTGGAATTTTGACTTCCATGAACTTGTTTGCCACCAAATTTAATGAGGTAATCTCTATGATTGAGAGACGGGCAGATCAACTTGACTATGTTCTTGTGGACACCCCTGGTCAGATTGAAATATTTACCTGGTCTGCTTCTGGTGCTATCATTACAGAAGCTTTTGCATCCACATTTCCCACTGTAGTGGCCTATGTTGTTGATACACCTCGTTCAGAAGATCCTACAACTTTCATGAGCAACATGTTGTATGCTTGTAGCATCCTCTATAAGACAAGGTTACCTCTCATCCTGACATTCAACAAAGTTGATGTAGCAGCACATCAGTTTGCATTAGAGTGGATGGAGGATTTTGAGGCATTCCAAACAGCAGCAAGTTCAGATCAGTCATATACATCAACTTTAACTCAAAGCCTTTCTCTTGTGCTAGATGAATTCTACAATAATCTGAAATCAGTTGGAGTTTCTGCTGTTTCTGGTGCAGGAATGGAAGCCTTCTTTCAGGTTGTCGAAGCCAGTGCAGATGAATACATGGACACCTACAAGGCTGATCTTGATAAAAGACGTGAAGAGAAGCAACGATTGGAGGAAGACCGTAGGAGGGGCGACATGGATAAACTAAGGAGAGACATGGAGAAATCTGGGGGAGAAACTGTAGTTTTGAACACTGGTTTGAAGGACAAAGAGAAAAGTAAAAGTAAAAGTATGATGGATGAGGAAGATGAGGTTGAGGAGGACGAGGTAACTGATGATGATGATGATTTGGGGATATATACTGAAGATGATGATGCTATAGACGAGGACGAAGATGAGGAGGTTGATAGGTTCGGCTTGTGA 1233 0.4177 MNVDNGSESAKLDNSSMQIDSDESSDQVKDNEKEKEELTETMNKMHIEGSSSGNGFPNFRRKPVIIIVVGMAGSGKTTLMHRLVAHTHIKNIRGYVMNLDPAVMTLPYASNIDIRDTVKYKEVMKQFNLGPNGGILTSMNLFATKFNEVISMIERRADQLDYVLVDTPGQIEIFTWSASGAIITEAFASTFPTVVAYVVDTPRSEDPTTFMSNMLYACSILYKTRLPLILTFNKVDVAAHQFALEWMEDFEAFQTAASSDQSYTSTLTQSLSLVLDEFYNNLKSVGVSAVSGAGMEAFFQVVEASADEYMDTYKADLDKRREEKQRLEEDRRRGDMDKLRRDMEKSGGETVVLNTGLKDKEKSKSKSMMDEEDEVEEDEVTDDDDDLGIYTEDDDAIDEDEDEEVDRFGL 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01693 410 MobiDBLite consensus disorder prediction 23 38 - -
Vimu7g01693 410 Coils Coil 310 330 - -
Vimu7g01693 410 CDD GPN1 64 304 IPR030230 GO:0003924
Vimu7g01693 410 Pfam Conserved hypothetical ATP binding protein 68 306 IPR004130 -
Vimu7g01693 410 PANTHER XPA-BINDING PROTEIN 1-RELATED 67 324 IPR004130 -
Vimu7g01693 410 MobiDBLite consensus disorder prediction 1 22 - -
Vimu7g01693 410 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 65 303 IPR027417 -
Vimu7g01693 410 MobiDBLite consensus disorder prediction 322 347 - -
Vimu7g01693 410 Gene3D - 63 321 IPR027417 -
Vimu7g01693 410 MobiDBLite consensus disorder prediction 1 38 - -
Vimu7g01693 410 MobiDBLite consensus disorder prediction 355 370 - -
Vimu7g01693 410 MobiDBLite consensus disorder prediction 322 410 - -
Vimu7g01693 410 FunFam GPN-loop GTPase 1 63 321 - -
Vimu7g01693 410 Coils Coil 21 48 - -
Vimu7g01693 410 MobiDBLite consensus disorder prediction 371 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01693 Vimu-Chr7 15663965 15667158 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01693 K24104 - gmx:100797318 649.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01693 7 15663965 15667158 Vimu7g01693 7 15663965 15667158 ECH