Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01687 ATGAAGCCGCTATCTTTTATTTTTTACACTGTTGTTATAGCAACAATTTCGTTGCCAGCAGCAACTAACTGCAGAGTCGTTCTGCTAAACAAGGCCAATCTGATAGAAGAAACATGCAAGCAGACACCCCATCAAAACCTTTGCATCCAATACCTCTCTTCTGACCCTCGCAGCGCCGATGCAGATATCGCAGGGCTAGCTCTAATCATGGTCAATGTAATCAAAACCAAAGCAAATAATGCCTTGGACAAGATCCAACAACTTCTTCAGGGAAGCCATGAACATTCTCAAAAGGAAGCACTGAGTTCTTGTGCTGGTAGATACAAGACAATTCTGGAAGCTGACGTGGCACAAGCCATTGCTGCTCTGAAGAAAGGAGATCCCAAGTTCGCAGAAGATGGTGCGAATGATGCTGCTGTTGAGGCCACCTCTTGTGAGAACGGTTTCTCTGGGAAATCGCCACTCACTAATGAGAACAATGCCACGCATGATGTTGCAGTCACAACAGGAGCTATAGTTAGACAATTGCTCTAG 534 0.4513 MKPLSFIFYTVVIATISLPAATNCRVVLLNKANLIEETCKQTPHQNLCIQYLSSDPRSADADIAGLALIMVNVIKTKANNALDKIQQLLQGSHEHSQKEALSSCAGRYKTILEADVAQAIAALKKGDPKFAEDGANDAAVEATSCENGFSGKSPLTNENNATHDVAVTTGAIVRQLL 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01687 177 PANTHER PECTINESTERASE INHIBITOR-LIKE 5 167 - -
Vimu7g01687 177 Pfam Plant invertase/pectin methylesterase inhibitor 33 165 IPR006501 GO:0004857
Vimu7g01687 177 CDD CIF_like 32 176 IPR034087 GO:0004857|GO:0043086
Vimu7g01687 177 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 176 IPR035513 -
Vimu7g01687 177 FunFam Invertase/pectin methylesterase inhibitor family protein 30 177 - -
Vimu7g01687 177 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 177 IPR035513 -
Vimu7g01687 177 NCBIfam pectinesterase inhibitor domain 4 176 IPR006501 GO:0004857
Vimu7g01687 177 SMART PMEI_2 30 172 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01687 Vimu-Chr7 15633999 15634532 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01687 - - gmx:100306719 255.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01687 7 15633999 15634532 Vimu7g01687 7 15633999 15634532 ECH