Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01685 ATGACAAACTCGAAACCACTGATTCTGTGTTTCTTTCTCCAAGCCATTGTTGTTATGGTTACAATACCAGCAAGCCACTGCAGAAGCTTTCTTCCAGGCAATGAAAATCTGATACAGAGCACTTGCAAGAGAACACCCAACTACAATCTCTGCCTTCAAACTCTGAAGGCAAGCCCTGGAAGCTCCACTGCTGATGTCTCCGGGCTGGCTCTTATCATGGTCAAAGCGATGAAAGCCAAAGCAAACGATGCCTTGAAAATAATCCATGACTTGCAGAGGGAGGGAGCAGGACCTAAGCAGAGAAGAGCCTTGAGTTCTTGTTATAGTAAATACAAAGCAGTTCTGATAGCTGATGTTCCACAAGCCACCGAGGCTCTGCAGAAAGGAGACCCCAAGTTTGCTGAAGACGGAGCCAATGATGCTGCTAATGAGGCTACCTACTGTGAGAGTGATTTCTCTGGGAATTCTCCACTCACCAAACAGAACAATGCTATGCACGATGTTGCTGCTGTTACTGCTGCTATTGTTAGATTGCTGCTCTAG 543 0.4622 MTNSKPLILCFFLQAIVVMVTIPASHCRSFLPGNENLIQSTCKRTPNYNLCLQTLKASPGSSTADVSGLALIMVKAMKAKANDALKIIHDLQREGAGPKQRRALSSCYSKYKAVLIADVPQATEALQKGDPKFAEDGANDAANEATYCESDFSGNSPLTKQNNAMHDVAAVTAAIVRLLL 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01685 180 SMART PMEI_2 33 175 IPR006501 GO:0004857
Vimu7g01685 180 PANTHER PECTINESTERASE INHIBITOR-LIKE 12 179 - -
Vimu7g01685 180 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 35 179 IPR035513 -
Vimu7g01685 180 FunFam Invertase/pectin methylesterase inhibitor family protein 33 180 - -
Vimu7g01685 180 Coils Coil 74 94 - -
Vimu7g01685 180 Pfam Plant invertase/pectin methylesterase inhibitor 36 175 IPR006501 GO:0004857
Vimu7g01685 180 CDD CIF_like 35 179 IPR034087 GO:0004857|GO:0043086
Vimu7g01685 180 Gene3D Invertase/pectin methylesterase inhibitor family protein 33 180 IPR035513 -
Vimu7g01685 180 NCBIfam pectinesterase inhibitor domain 13 179 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01685 Vimu-Chr7 15631732 15633238 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01685 - - gmx:100500640 283.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01685 7 15631732 15633238 Vimu7g01685 7 15631732 15633238 ECH