Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01680 ATGCGACCCTATGGTTTGTATGACATTGCTGCTGTTTCACTGGCTAATTCATTGACTCTCTTCCCATACATTGATGGAATATCTGAAAAGCTGGACTATATAGGCATAAACTACTATGGACAGGAAGTGGTTTCGGGTGCGGGCCTGAAGCTGGTGGAAAATGATGAGTATAGTGAATCTGGTCGTGGGGTATACCCTGATGGTTTATACCGCATGTTGCTTCAGTTCCATGAAAGATACAGACATCTAAAAATTCCCTTCATCATTACTGAAAATGGGGTTTCGGATGAGACAGATTTGATCCGCCGGCCATATCTCTTGGAGCATTTGCTAGCTGTTTATGCTGCCATAAAAATGGGTGTACGTGTACTTGGTTACCTGTTCTGGACTATTTCTGATAACTGGGAATGGGCCGATGGATATGGTCCCAAGTTCGGACTTGTTGCAGTTGACCGGGCAAATAATCTTGCACGGATCCCTCGCCCCTCTTACCATCTATTTTCTAAAATTGTGAACACGGGCAAAGTTACACGTGAAGATCGTGAAATAGCATGGGATGAACTCCAAAGAGCTGCCAAAGAGAAGAAAACGAGACCATTTTATCGGGCTGTGAATAAACACGGTTTAATGTATGCAGGTGGACTTGATGAGCCAGTACAGCGACCTTATATAGATCGAGATTGGCGGTTTGGTCATTACGAGATGGAAGGACTCCAGGATCACTTGAGCCGCTTCTCAAGATTCATTATTCGACCCTTCTCCCCCAAAAGGAAAACAAAATCTCAAGAGAAGAAGAATCCCAAATTAATTCTTCAGCCTCTTGAAACTTAA 831 0.4356 MRPYGLYDIAAVSLANSLTLFPYIDGISEKLDYIGINYYGQEVVSGAGLKLVENDEYSESGRGVYPDGLYRMLLQFHERYRHLKIPFIITENGVSDETDLIRRPYLLEHLLAVYAAIKMGVRVLGYLFWTISDNWEWADGYGPKFGLVAVDRANNLARIPRPSYHLFSKIVNTGKVTREDREIAWDELQRAAKEKKTRPFYRAVNKHGLMYAGGLDEPVQRPYIDRDWRFGHYEMEGLQDHLSRFSRFIIRPFSPKRKTKSQEKKNPKLILQPLET 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01680 276 PANTHER GLYCOSYL HYDROLASE 28 178 IPR001360 GO:0004553|GO:0005975
Vimu7g01680 276 ProSitePatterns Glycosyl hydrolases family 1 active site. 87 95 IPR018120 -
Vimu7g01680 276 MobiDBLite consensus disorder prediction 256 276 - -
Vimu7g01680 276 Pfam Glycosyl hydrolase family 1 27 173 IPR001360 GO:0004553|GO:0005975
Vimu7g01680 276 PRINTS Glycosyl hydrolase family 1 signature 144 156 IPR001360 GO:0004553|GO:0005975
Vimu7g01680 276 PRINTS Glycosyl hydrolase family 1 signature 120 137 IPR001360 GO:0004553|GO:0005975
Vimu7g01680 276 PRINTS Glycosyl hydrolase family 1 signature 87 95 IPR001360 GO:0004553|GO:0005975
Vimu7g01680 276 PRINTS Glycosyl hydrolase family 1 signature 30 44 IPR001360 GO:0004553|GO:0005975
Vimu7g01680 276 PRINTS Glycosyl hydrolase family 1 signature 99 110 IPR001360 GO:0004553|GO:0005975
Vimu7g01680 276 SUPERFAMILY (Trans)glycosidases 7 178 IPR017853 -
Vimu7g01680 276 Gene3D Glycosidases 5 186 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g01680 1 250 Glycoside Hydrolase AT3G06510 67.254 1.61e-137 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01680 K21362 - gmx:100792401 516.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01680 7 15599644 15604239 Vimu7g01680 7 15599644 15604239 ECH