Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01135 ATGGTGTACTCCTATTACACGCCCACTTACTACTCAACCCTCCATGACTCCATCACCTCGCTCTGTAAGACCATTCTTCCTTTCAGCTTCAAGAAACGACCATTACCTGCGGCAGAACACAAATTGTCCAAGCTGCAATCAGACAACCTTAAATGGCAGCAAGACTCTTTCCACCAGGTGTTAAACTTGATGGGTCTCCACAAAGAAGGCATCGTGGCTGAATCTGAGGTTTCTGCCTTCAGAATTCACCTGCTAGACACCCTCATTGTTTCTCCTCCAGAACAAGAACACCCTGTTATACTGAGAGACAAGCTTCTCTTTCTCGAGGAACTTCTGTATGCGAAGTGCATTTCTGAAGAGGAATACCATTCTTCTAAGAGGCCATTGCTTCAGAGGCTGGCGGCTCAAGGAGCTCAGATTGAAGCCAGGGATGTGATAGTGGCAAAGACTAAGGAGTCAAAAGAGAATTTGGAAGAAGAGTGGTCGGTGATTGACTTGAAGGATGAGAAATGCTCTGTGAACAAAGAGAATTTGGGTTGTAAGAGCAGATCTAATCAGGGATCATCGATGAAGCAGATTAAAGGAGCTGCCTTGGTTTTTGGCTTTGGCAGAGCTGGGAAAAATGGGACAGAAAAGAGCATATTTGATTCACCTTCTTTGTCTGCAAAAAATGAAAACCCTTTCTGGGATGGTCAAACAAAGGGAGCACAGAGTGAAGGAGGTTCAATTCTTATGGAGGAAAGTGAGCCTCCAGAAGCAGTTAAGGAGAGTAGTGGTTTGGAGAAGTTAAAGAGGAAACCATTTAGGTCTTTGTTTCATAAGGAGCAAAAAGAGACACATGGTGGTGGTGGTGCTGAGCAAGATCACAGATCAGGGAAATCAGTCAAAAAGCAATGGGGGTTTGAAGGATTCAAGAAATGGAAGAGAAATGAGTCAGAAGATGAGACATGTTCTTTGTCACATAATGAGAGGTCAGATAATGAGGCCTTTTCAGGTCCCTTTGCAAAGGGATTTGGGGAGGGACCAGACACCAAGTTAATGAAGAAGAAGTTGCATTCTGATGGTTCTCCATCTGATTTTTTCATAGATAAGGTTTTGGGAGACAAGATAAAAAAGGAGTTGTCTAGAATTCAGACAGAACTCAGCAGCACAAACCCACATCTTAAATTTTCTAATGATCAGATTGAAGCAATTTCTACCAGAATTCCAGTGGACAAGGCTGAGTTGAAAAACTACTTTCCCAAATCTTGGTGTGACCGATATGGTGATGTTGTACTGGACGTTGTGAAGAAAGAATTCAAAGACCATGTTGCGGAAATGGAGAACATGCGGAATGTTGCTAGAGAACGACACAGCAACTCTAGGCGCTGGACAACAACCACATTTGACAATGACGAAAACATTCACCCAAACCCTTTTGGACACCGTGAAAACTCAGTTCGCAGCAGTAACATCAATCCATTTTCTCATGGTTTTGCTTAG 1482 0.4318 MVYSYYTPTYYSTLHDSITSLCKTILPFSFKKRPLPAAEHKLSKLQSDNLKWQQDSFHQVLNLMGLHKEGIVAESEVSAFRIHLLDTLIVSPPEQEHPVILRDKLLFLEELLYAKCISEEEYHSSKRPLLQRLAAQGAQIEARDVIVAKTKESKENLEEEWSVIDLKDEKCSVNKENLGCKSRSNQGSSMKQIKGAALVFGFGRAGKNGTEKSIFDSPSLSAKNENPFWDGQTKGAQSEGGSILMEESEPPEAVKESSGLEKLKRKPFRSLFHKEQKETHGGGGAEQDHRSGKSVKKQWGFEGFKKWKRNESEDETCSLSHNERSDNEAFSGPFAKGFGEGPDTKLMKKKLHSDGSPSDFFIDKVLGDKIKKELSRIQTELSSTNPHLKFSNDQIEAISTRIPVDKAELKNYFPKSWCDRYGDVVLDVVKKEFKDHVAEMENMRNVARERHSNSRRWTTTTFDNDENIHPNPFGHRENSVRSSNINPFSHGFA 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01135 493 MobiDBLite consensus disorder prediction 476 493 - -
Vimu7g01135 493 MobiDBLite consensus disorder prediction 450 493 - -
Vimu7g01135 493 MobiDBLite consensus disorder prediction 213 260 - -
Vimu7g01135 493 MobiDBLite consensus disorder prediction 213 239 - -
Vimu7g01135 493 MobiDBLite consensus disorder prediction 318 338 - -
Vimu7g01135 493 MobiDBLite consensus disorder prediction 275 295 - -
Vimu7g01135 493 Coils Coil 430 450 - -
Vimu7g01135 493 PANTHER OS09G0556800 PROTEIN 1 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01135 Vimu-Chr7 11059638 11062037 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01135 - - gmx:100819771 840.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01135 7 11059638 11062037 Vimu7g01135 7 11059638 11062037 ECH
Vimu7g01135 7 11059638 11062037 Vimu10g00711 10 6155242 6157984 PCT