Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00951 ATGGGTGGTGGAGCTCTTGAAACGAATTGTTTAACAAATGGGGAAACTGAGAGCAGTCTTCACAGACAGTTTTCTCCAGCTCCTGCTGCACTCGACAACTCGCTTTCTGATGCAAACGATGCAGTTGCTGACCATGATGTTCCTGCCAAGAGGGCCAGGCTGCAGAAGGAATTGACCTTTCAGGATATGTATCAAAATGAGGGCGTGTTTGACGAGGATGACGAGGATGACAGTGATTGGGAGCCGTTTCAGTTACACAAGTGTGTGGAATTTGAAATCAAAAAGTGGTGCTGCAGAAACTGTACTATGATCAATTTGGATTGCAATGACTGTTGCTATATATGTGGGGAGCACAGGGAGTCTAAAATCCTCAGCCTTGGGTTTTTTGCATCTCCTTTAGCTCAAGATGACGATCTGATTGAAGTCCAGGGAGATGTAAAACGACTGAAAGATGATGTTGGTTGTAATAGCCTAGGGTTTATTGTTATTACTTTTGAAACTTCATCTGCTGTCATTATTTATAATCATTTAGCTGTTGCATGTGGACTGGAAAGGGGCGACGTAGGATGGGAAGCTCAGCTCCAAATTTATTTAAGTTTGATCTATATCTTTGTAGATGTTGGCTCGCAGAAATCAGTGCCAAATAGTTCTACAGCGATTGGCTTTGATGAGAGAATGTTGTTGCATGCAGAAGTTGATAAGAAATCACCTCCACATCCTGAGAGGCCAGATCGTCTTCAAGCCATTGCTGCTAGTCTTTCTAGAGCTGGCATATTTCCTGGAAAATGTTATGCAATTCCTGCTAGGGAAATCACACCAGAAGAACTTATTACGGTTCATTCTTTGGAGCATATTGAGTCTGTGGAAGTTACAACTGAATCACTCTCTAGTTATTTCACTCCAGACACATATGCCAATCAGCATTCAGCACTTGCTGCTAGGTTAGCTGCTGGGTTATGTGCTGATCTGGCATCTGCAATTGTTTCCGGACGTGCCAAAAATGGATTTGCTTTGGTTAGGCCTCCTGGTCATCACGCTGGTGTAAGACAGGCAATGGGGTTCTGCCTTCACAATAATGCTGCTGTGGCAGCATTGGCTGCTCAAGCTGCAGGGGCTAGGAAAGTGCTAATTTTAGATTGGGATGTTCATCATGGAAACGGGACCCAGGAAATCTTTGAACATAACAAATCAGTCTTGTATATATCATTGCATAGACACGAGGATGGAAAGTTTTATCCTGGTACTGGAGCTGCTGAAGAGGTTGGTAGTATGGGTGCTGAAGGGTACTGTGTGAATATTCCATGGAGTCGAGGAGGAGTTGGTGACAATGACTACAATTTTGCATTTCAGCATGTTGTCCTTCCTATAGCTTCTGAGTTTAATCCAGATTTCACCATAGTATCTGCTGGATTTGATGCTGCAAGAGGCGATCCCCTAGGATGTTGCGATATTACTCCCTCTGGCTATGCACACATGACGCATATGTTGAATACCCTCTCGGGTGGAAAATTGCTTGTTATTCTTGAGGGGGGCTATAATCTTCGATCTATATCATCTTCCGCAACTGCAGTAATCAAGGTGTTACTGGGTGAGAGTCCTGGATGTGAACTGGAAAATAGTTTCCCTTCCAAAGCTGGCCTGCTAACCGTTCTGGAAGTCCTCAAAATTCAGATGAAATTTTGGCTTTCCTTGGGTCCGATTTTTGTGAATTTGGAGTCACAATGGAGGATGTACTGTTTCCAAAAAAAAAGTGCAATGGAAAGGCAAAGCTTCCGGTTGTTGTGGACTGATCTTAATCTTAGGGGGCCTTGTCTAATTTGCATTGAGCAAGAAGATGGAGATGGAATGGAAGTGATAGCAAACATAGACGTTGAAGTCCTTTATCAAATTTCTTCTAAGGATGTGCACTTTGATGTCAACAAGGATGTCTCGGAAGGCCAATTGATGGACATTGATGATATAGTGATTGTCGAGGTAGTTGGTTTTGTGAATGCTGAGGCTGACATGTACGGAGCTGAATACAATTGTGTTCCAATATAA 2040 0.4314 MGGGALETNCLTNGETESSLHRQFSPAPAALDNSLSDANDAVADHDVPAKRARLQKELTFQDMYQNEGVFDEDDEDDSDWEPFQLHKCVEFEIKKWCCRNCTMINLDCNDCCYICGEHRESKILSLGFFASPLAQDDDLIEVQGDVKRLKDDVGCNSLGFIVITFETSSAVIIYNHLAVACGLERGDVGWEAQLQIYLSLIYIFVDVGSQKSVPNSSTAIGFDERMLLHAEVDKKSPPHPERPDRLQAIAASLSRAGIFPGKCYAIPAREITPEELITVHSLEHIESVEVTTESLSSYFTPDTYANQHSALAARLAAGLCADLASAIVSGRAKNGFALVRPPGHHAGVRQAMGFCLHNNAAVAALAAQAAGARKVLILDWDVHHGNGTQEIFEHNKSVLYISLHRHEDGKFYPGTGAAEEVGSMGAEGYCVNIPWSRGGVGDNDYNFAFQHVVLPIASEFNPDFTIVSAGFDAARGDPLGCCDITPSGYAHMTHMLNTLSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCELENSFPSKAGLLTVLEVLKIQMKFWLSLGPIFVNLESQWRMYCFQKKSAMERQSFRLLWTDLNLRGPCLICIEQEDGDGMEVIANIDVEVLYQISSKDVHFDVNKDVSEGQLMDIDDIVIVEVVGFVNAEADMYGAEYNCVPI 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00951 679 ProSitePatterns Zinc finger RanBP2-type signature. 96 115 IPR001876 -
Vimu7g00951 679 Gene3D Histone deacetylase domain 215 566 IPR037138 -
Vimu7g00951 679 PRINTS Histone deacetylase superfamily signature 462 472 IPR000286 -
Vimu7g00951 679 PRINTS Histone deacetylase superfamily signature 374 389 IPR000286 -
Vimu7g00951 679 PRINTS Histone deacetylase superfamily signature 341 364 IPR000286 -
Vimu7g00951 679 PANTHER HISTONE DEACETYLASE 9-RELATED 206 565 IPR017320 GO:0000118|GO:0004407|GO:0006325|GO:0016575
Vimu7g00951 679 SUPERFAMILY Arginase/deacetylase 215 543 IPR023696 -
Vimu7g00951 679 FunFam Histone deacetylase 15 211 576 - -
Vimu7g00951 679 Pfam Histone deacetylase domain 239 527 IPR023801 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00951 Vimu-Chr7 9227654 9239292 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00951 - - gmx:100802870 843.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00951 7 9227654 9239292 Vimu7g00951 7 9227654 9239292 ECH