Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00948 ATGAGTAGGTCTCCTTCCTTTAAAGTCCGAGAAGAACTTCTTCCCAGTCTTGATCCTGAGTCTTTACAGAGATGGATAGTTGGCTTTTGTGCTATAAGGTTTGATCTTGAACAAGGCCAGCTTGTAGAAGTATGTTATCCGCCTGGCTGTCTTACGAATGATGAAGAGCTGGAGATTGCATATAGTTCGTTTCCGGATTCCATTTCCCAGCAACAAAACCGCTCAAGCATTCATGATTGCATCTTCTTTTTCCGATTTCGTAGGCACCTCAAATCTCAATCCACTGAAATGGACAAGAACTTTTCTCCAAAGTCCATAGATAAAAATAATGTTGGTGAAGAGTTATCCAGTACAAGCAGTGCTAATGTTTCTAAATACATGTATGGTTTTGTTTTTAATAGACAGATACATGATGAGAGGCTAAAGCGAGGAGGGGAGCAGAAGTCTGTGGTCGTTTTGTCCCACAGTCCTTATTCAAGTGTGTTTAGACCTTTATTACAGATTATAGGTCCCTTATATTTTGAATTTGGTAAGGTAGCACTGGAGCATATTGCAGCTTATGTTTCAGCATGGCCTGCTCCTATTCCTGGAAAGCTAATGGATCTTCCGATTGGGAATGAAACCCTTAAAGTGAACTTGCCACCTGTTCATTGCTTGCCTTTGGAAAATGGATTATCTTTTGATGAGTCTGCTTCTCCTGTGGCACCTTTACTTCCTAGTAATCAGTCTATTCCGCAGGGCCTTTTTCATGATGCAGATATTTTTGGTGCTTTCCGTGGCATCTTATTGCAGCTTTGGTTGTTATGGGAGTTGTTAGTCATTGGTGAACCAATTCTGATCATTGCACCAACCCCTTCCCAGTGTTGTGAGGCCGTTGCCAGTCTTGTGAGTTTGATTGCACCATTACTTTGTAGTGTTGACTTCCGGCCTTATTTTACCATTCATGATCCTGAGTTTTCACACTTGAACTCAATTCGGGAAGGGGAAACCTTCCCTTCAATGGTTTTAGGGGTGACAAATCTTTTCTTCCTTAAGGCTCTCAAGAAAATCCCCCACATTGTTTCAGTTGGAAGTCTCCATCCTAGTTCAAATAGGGTTGCCCTTTCAACTAGGTCTTCTGCTGGCAAAGTTTCTGGTAGACCTGATGGTGGGCTTCAACAACTTTCCCTACAGAGCCTTCAGAAGTTTTCTCCTTCAAGTTTACTGAATGCAATTAAGTTGCGGAGAGATGGTCCTCTTTGTCTCATGACAGAACATAAGGAAGCCATTTGGACTACATATTCTGCCATAACTAAGCCCGACACCTCTATTTTAAATAGGCTTGTAGATGCAGGCATGTCACCAAGAGTTGAGGAATCAATGTCAGTTGTTAACAATGAGATATTACGGCGGCATTTCTTGGAGCTCACAATTAATTTCTTGGCCCCTTTTGGTCCATATTTTAGGATCACAGCTCCATTGGAAGGATCTTCTCCTTATGTTGATCCTCCATCTTTGCCTCCATTTAGTGCTGATGAATTTCTTTCAAGTTTATCAACCAGAGGTCCAGGGAAGTTCATTTTGAAGAGAATGAAGTCTAACTGGCTCAACTTCTACAGGCGGTTCCTGAATGGACCCAACTTCATGCCTTGGTTTCAGAGGAGGCGTGCTGTAGCTGAACGGGAACAAGATAGATTGTGGAGGCATTCAAGAATGAAAACTGATATGCAACAGATTGTATCTAAAATGTCTGAATTGGAAATTGTGGATTCCTTCAATGTTATAGAGAAACTTCTACATAGAGAATTGCAGGTGCTGCAGCAACCTGGAAATGGAGGTATTGATTCGACTGCAACTTGTGAGAAACTAATGAGAGATCTTCAAACAGTTTTCAATGCGCTTACAAAAGATATGCAACAAATCATGCTTTCAAATCCAGAAAGGGCATCCCTTCTTCAACGTATTGTGAATTGA 1953 0.4147 MSRSPSFKVREELLPSLDPESLQRWIVGFCAIRFDLEQGQLVEVCYPPGCLTNDEELEIAYSSFPDSISQQQNRSSIHDCIFFFRFRRHLKSQSTEMDKNFSPKSIDKNNVGEELSSTSSANVSKYMYGFVFNRQIHDERLKRGGEQKSVVVLSHSPYSSVFRPLLQIIGPLYFEFGKVALEHIAAYVSAWPAPIPGKLMDLPIGNETLKVNLPPVHCLPLENGLSFDESASPVAPLLPSNQSIPQGLFHDADIFGAFRGILLQLWLLWELLVIGEPILIIAPTPSQCCEAVASLVSLIAPLLCSVDFRPYFTIHDPEFSHLNSIREGETFPSMVLGVTNLFFLKALKKIPHIVSVGSLHPSSNRVALSTRSSAGKVSGRPDGGLQQLSLQSLQKFSPSSLLNAIKLRRDGPLCLMTEHKEAIWTTYSAITKPDTSILNRLVDAGMSPRVEESMSVVNNEILRRHFLELTINFLAPFGPYFRITAPLEGSSPYVDPPSLPPFSADEFLSSLSTRGPGKFILKRMKSNWLNFYRRFLNGPNFMPWFQRRRAVAEREQDRLWRHSRMKTDMQQIVSKMSELEIVDSFNVIEKLLHRELQVLQQPGNGGIDSTATCEKLMRDLQTVFNALTKDMQQIMLSNPERASLLQRIVN 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00948 650 ProSiteProfiles Tripartite DENN domain profile. 27 546 IPR037516 -
Vimu7g00948 650 PANTHER UNCHARACTERIZED 12 639 IPR024224 GO:0005085
Vimu7g00948 650 Pfam Stabilization of polarity axis 259 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00948 Vimu-Chr7 9212893 9215747 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00948 - - gmx:100790861 1107.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00948 7 9212893 9215747 Vimu7g00948 7 9212893 9215747 ECH