Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00938 ATGGCGGACCAATATCCAAGCCCGGCCCAAGCCCAGGCCCAGAGACCCTCCCTCTCTGCCGCGTTCCTCCAAAAGCTCCAAGACCGGGGCCCTAACTCTGCCCACCTGGGCGGCATCTTCACCCTTCTCATAACCGCCTCCGTCTTTCTCCTCCTGGCGGGGCTCACCCTCACAGGCGCCATTCTCGGTCTCATCTTTTTCACGCCTCTGATCATCGTATCAAGCCCCGTCTGGGTTCCAGCCACCATCATCTTGTTCGTCATCACCGCGGGCTTCTTCTCCGTCTGTGGATTCGCGGTTGCCCTTGTCGCCGCCTTGTCCTGGACGTACCGCTACTTCAGAGGCCTCCACCCACCCGGTTCCGACCGGGTCGACTACGCCCGGAGCCGCATATACGACACCGCCAGTCACGTCAAAGACTACGCCAGAGAATACGGTGGCTATTTGCAGAGCAAGGTGAAGGATGCAGCGCCCGGCGCCTGA 483 0.6128 MADQYPSPAQAQAQRPSLSAAFLQKLQDRGPNSAHLGGIFTLLITASVFLLLAGLTLTGAILGLIFFTPLIIVSSPVWVPATIILFVITAGFFSVCGFAVALVAALSWTYRYFRGLHPPGSDRVDYARSRIYDTASHVKDYAREYGGYLQSKVKDAAPGA 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00938 160 PANTHER OLEOSIN 30 155 IPR000136 GO:0012511|GO:0016020
Vimu7g00938 160 Pfam Oleosin 38 146 IPR000136 GO:0012511|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00938 Vimu-Chr7 9085374 9086550 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00938 4 160 Lipid Metabolism Gene Families AT3G18570 52.866 1.14e-48 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00938 - - vum:124837146 305.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00938 7 9085374 9086550 Vimu7g00938 7 9085374 9086550 ECH