Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00927 ATGCTACAAAGAGTAGTGCGATACTCCGCCCAACCATTCAATCCTCCAACTCGCACGACACCACCATCACTTTCGCCGATTCAATTAATACCCACTTCTCCATCTTTCCCAATCCTCAAACAGCAATGCAGATTATCACGTAGAGAGCTCACAATCTTCAGCAACTCTTGCTTGCTACTTCTATTGGGTAATCAGGCAGTGGATGGATCCAGCGCAAGAGCAGAAGCAGCACTTGCAAACACAAACAACAGTGATCAACCGGAAGGGAATGTGGTTTTTGTAGAAGAGGATGCTGCTAACACAAGCAGCACTGCTCAACCAGAAGAGAATCGTGTTTTAGCAGAAGATGTTGCTAACACAAGTAACACTGCTCAACCAGAAGAGAATCGTGTTTTAGCAGAAGATGTTGCTAACCAGCAGGCAGAAAATTTGAATTTAGCAGAAGAAAATGTTACTCAAACAAGCAACAGTGACCAACCAGAAGACAATCTAACTACCACTCCTACCTGCACCGAAAGAAAAACTACCAAACGAGTATTTTTAGACATATCTATTGATGGCGAACCTGCTGGTCGCATTACCATAGGACTTTATGGAGATGAGGTCCCTGCAGGAGTTGACAGGTTTAGTAAGATTGTGAGTGGAGCCGCTGGTATTAGCTACAGAAGAAAAGAGTTTGTCAAAATCATGCCCAATTATGTTCAACATAGCGGCCTTAGATCCTATGGGGTGGATGCTGAAATTTCTTCGAAGACAGGTAGCAACTTGGGAGCTAATAGTCTGGTTCAGGAATGGGAGACAGAGTATGAGAAATGTCCTGGGACTAAAAACGTGACTGGAAGTGTTGGCATTATTGTGAGAAACCCATCAAAACCACCCCCAAAGATGAAGCTGGTTGCGAAGAAAGGGAAGCTTGAGATTGATCAAGAAGAAGTAGGTATTGATCCCAATGGTACAGAATTTGTCATAGTTACAAAGGACTCGCCAGAATTGGATACATCGTCTCTGGTAATTGGAAGAGTGATAGGAGGCATGGAGGTTGCGCAGAGGATCGGTCAGGTTAAAACAGTACAGGAGAATACAGGATCTCCATATTTTAGGGTGGCAAAGCTGATAGGAGACAAGAGAGCTGTTGTAGCAGAAAGAGGATTCAACCGCCCTTATTCAAAGGTCATTGTTACAAACTGTGGTTTGATGCAGTAA 1203 0.4372 MLQRVVRYSAQPFNPPTRTTPPSLSPIQLIPTSPSFPILKQQCRLSRRELTIFSNSCLLLLLGNQAVDGSSARAEAALANTNNSDQPEGNVVFVEEDAANTSSTAQPEENRVLAEDVANTSNTAQPEENRVLAEDVANQQAENLNLAEENVTQTSNSDQPEDNLTTTPTCTERKTTKRVFLDISIDGEPAGRITIGLYGDEVPAGVDRFSKIVSGAAGISYRRKEFVKIMPNYVQHSGLRSYGVDAEISSKTGSNLGANSLVQEWETEYEKCPGTKNVTGSVGIIVRNPSKPPPKMKLVAKKGKLEIDQEEVGIDPNGTEFVIVTKDSPELDTSSLVIGRVIGGMEVAQRIGQVKTVQENTGSPYFRVAKLIGDKRAVVAERGFNRPYSKVIVTNCGLMQ 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00927 400 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 180 398 IPR002130 GO:0000413|GO:0003755
Vimu7g00927 400 Coils Coil 129 149 - -
Vimu7g00927 400 FunFam Peptidyl-prolyl cis-trans isomerase B 169 400 - -
Vimu7g00927 400 SUPERFAMILY Cyclophilin-like 174 399 IPR029000 -
Vimu7g00927 400 Gene3D - 167 400 IPR029000 -
Vimu7g00927 400 MobiDBLite consensus disorder prediction 149 169 - -
Vimu7g00927 400 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP26-2, CHLOROPLASTIC 5 400 IPR044185 -
Vimu7g00927 400 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 181 359 IPR002130 GO:0000413|GO:0003755
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00927 K03768 - gmx:100800469 612.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00927 7 9012568 9013911 Vimu7g00927 7 9012568 9013911 ECH