Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00926 ATGGTGCAAGATTCTGAAAAGAGATTCCATTCCATCATGGACAAGCTATTCCATCCTCCCAAGCCCCCTTCCTCCTCCAGTTCTTCTGGAGTGCAGTTATCAGGGAGTAAGAAACGTCCTTACCCGTCAGGGGGGATTGAGTTGAATCGGAGGGGGGATGTTGCTGAGGGACAGCAGTCCTCCTCGGCGGCGTCCACGGCACTGCAGGGACCACTCTGCCGACCGTGGGATCGTGGTGACTTTATGAGGAGATTAGCTACATTCAAATCTATGTCGTGGTTTGCTAAACCAAAGGTAGTTATGGAGAAGGCGGCATTAGTATTTAGCTTAAAGTTGGATAATGGACATAAATTACTTTGCCCATGGATTGATAATGCCTGCAGTGAAACACTGGCACGATTTCCTCCTACAACTCCAGAGATATTAGTTGAAAATTTCAGAGAACACTGTTTTGCACTCTTGCAACTATCTGCTCTTCCACGAATTTCATCTTCTGCTATAGCCTACATTCAAAGCCAAAGTCCACTTCTGGAAGACTTTCTTGGGAAATCTTTGATGCTGGAGTGTGGAAATGGATCTACTGAAAATTCTGGGAGTGTGGATTTTAATAGTCAGGAGGAACTGAAATTGTATTATCAGGTAATAACTGGTTTTCTAGTAAGTTCAAAAATCTCATTTTCTGTATTAGTATGA 693 0.4372 MVQDSEKRFHSIMDKLFHPPKPPSSSSSSGVQLSGSKKRPYPSGGIELNRRGDVAEGQQSSSAASTALQGPLCRPWDRGDFMRRLATFKSMSWFAKPKVVMEKAALVFSLKLDNGHKLLCPWIDNACSETLARFPPTTPEILVENFREHCFALLQLSALPRISSSAIAYIQSQSPLLEDFLGKSLMLECGNGSTENSGSVDFNSQEELKLYYQVITGFLVSSKISFSVLV 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00926 230 MobiDBLite consensus disorder prediction 21 36 - -
Vimu7g00926 230 MobiDBLite consensus disorder prediction 1 15 - -
Vimu7g00926 230 MobiDBLite consensus disorder prediction 1 71 - -
Vimu7g00926 230 MobiDBLite consensus disorder prediction 54 68 - -
Vimu7g00926 230 Pfam C3HC zinc finger-like 75 102 IPR012935 GO:0008270
Vimu7g00926 230 Pfam C3HC zinc finger-like 105 159 IPR012935 GO:0008270
Vimu7g00926 230 PANTHER NUCLEAR-INTERACTING PARTNER OF ALK 1 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00926 Vimu-Chr7 9006477 9014297 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00926 - - vum:124834965 406.371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00926 7 9006477 9014297 Vimu7g00926 7 9006477 9014297 ECH