Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00909 ATGTTCCGCATTAGCAACACCGTTGTCGGCGCGCTCAACATTCTCTCCTTGCTCCTGGGCGTGGCCGCCGTGGCCTCCTCCGCTTACATCCACATCCGCGGTGGCTCCGACTGCCAGAAGGTCCTGCAGGTGCCGCTTCTAGTCGGCGGCATCTTCGTTGTGCTGGTCTCCGCCTTGGGAATCGTGGGGTCGCTGTACCGCGTCAACAAGGCTCTCTACGCCTACCTCTTCGTCACTTTCGCGCTCATCGTGGGCCTCGCCTTCTTCACCGTCTTCACGCTATTCGTGACGAACAGGAAGGTGGGGCAGCAGGTTTCCGGCAAGGGATACGGCGAGTACAGGGTGGCCGATTTCTCCCACTGGCTGCAACGCTACGTCGTCAACAACAAGAACTGGGACGAGGTGAAGAGTTGCTTGATGGACGCGCACGTGTGCCAGAACCTCGCCATCAACGGTGGCCGCAATAACGACTTCCTCATTTTCAAACACCTATCAACAACGCAGTCTGGTTGTTGTAAACCACCAGCGTATTGTGGGTTCATAATGAAGAATGTTACGTTCTGGGAAGTGCCAAAAAAGGGTCCAGCAGTGAATAATTCTGACTGCAGCACTTGGAACAACAGAGAAGACAAACTGTGCTACGATTGCAATTCATGCAAGGGAGGAGTTTTGGCTAACATAAGGAACCAATGGAGACGTCTCACTGTATTCAACGCATGCGTGCTTTTGGTCGTCACTGCCATATATGCCTTGGGCTGCTACGCCATCAAGAACAACAGATTCGATTCACAGTGCAACCACCCCAAAACACCATCTCCTTGA 822 0.5365 MFRISNTVVGALNILSLLLGVAAVASSAYIHIRGGSDCQKVLQVPLLVGGIFVVLVSALGIVGSLYRVNKALYAYLFVTFALIVGLAFFTVFTLFVTNRKVGQQVSGKGYGEYRVADFSHWLQRYVVNNKNWDEVKSCLMDAHVCQNLAINGGRNNDFLIFKHLSTTQSGCCKPPAYCGFIMKNVTFWEVPKKGPAVNNSDCSTWNNREDKLCYDCNSCKGGVLANIRNQWRRLTVFNACVLLVVTAIYALGCYAIKNNRFDSQCNHPKTPSP 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00909 273 PANTHER TETRASPANIN-8-RELATED 3 260 IPR044991 GO:0009734|GO:0016020
Vimu7g00909 273 Pfam Tetraspanin family 6 248 IPR018499 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00909 Vimu-Chr7 8880350 8881322 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00909 1 260 Miscellaneous Gene Families AT1G18520 45.865 1.62e-82 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00909 - - gmx:100815322 493.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00909 7 8880350 8881322 Vimu7g00909 7 8880350 8881322 ECH