Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00892 ATGCAAAAGGCATCAAATCAACCTTCTATATTCACAAGATTGGAAGTGACCCTTATTCATCATATAAATGACAAGATGGCTCTACAGGGAACGTGGCAGGAGATTTCTCGATTGAGGTATGAACTGTGTCCACGAGTCATGAAAGAGAGGAAGTTTTGGAGAATATATTTTATACTTGTGAATAATCATACTGCACCGTATGACATAGGAAGCTATGAGAATAAGTACATGGAAGATGAAAAACTAAAATCTTCTGAACAAGGAAAAGATCGCATAGTCACGATGAAACCATTAAATGCTGAATTGATCTGTAACCAAGAGGCGCAGGAAATGCCTAAAAAGGACAATTTATCAACTTCAACTGAGCAAGACTTGGATGTATTTCTTCTGGGAGAAGGAAACAGTGATGACGAGCCCGCCTATACCACTATGTTGTCCGGAGTTGGAGTTATATCCAATGACAGTATTAGATTACTCTTTTGGGTATTTGAGTTAGAGTATAGAATAACTTGTGCTCTCGGTGAATTTAAAATTGGTGACTTTACATTTGCCTACAATCTCTCTGGACTTTCAGATGATGGCGATGGAAGATACAATGATGATTTGGACAAACTAATGGATAATTCGGATGATGAGAAAGGGAAATGA 648 0.3781 MQKASNQPSIFTRLEVTLIHHINDKMALQGTWQEISRLRYELCPRVMKERKFWRIYFILVNNHTAPYDIGSYENKYMEDEKLKSSEQGKDRIVTMKPLNAELICNQEAQEMPKKDNLSTSTEQDLDVFLLGEGNSDDEPAYTTMLSGVGVISNDSIRLLFWVFELEYRITCALGEFKIGDFTFAYNLSGLSDDGDGRYNDDLDKLMDNSDDEKGK 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00892 215 ProSiteProfiles BSD domain profile. 34 64 IPR005607 -
Vimu7g00892 215 PANTHER BSD DOMAIN-CONTAINING PROTEIN 29 136 - -
Vimu7g00892 215 Pfam BSD domain 33 63 IPR005607 -
Vimu7g00892 215 SUPERFAMILY BSD domain-like 27 67 IPR035925 -
Vimu7g00892 215 Gene3D BSD domain 5 74 IPR035925 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00892 Vimu-Chr7 8709602 8717444 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00892 30 139 EF-hand Containing Proteins AT1G69030 48.214 2.27e-24 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00892 - - vra:106768410 196.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00892 7 8709602 8717444 Vimu7g00892 7 8709602 8717444 ECH