Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00886 ATGGAGAAGATACCTTTTATTAAAGTGATTTTCAGTTCAGAAATCATGGCTGAAGTGGATGAGGAGCATGTTCATACTCTACACGGCGGCGCCGGCGACATTCCCCTTTCGCTACCACCGGAGCGCCGTCAGCCACGAGAGGAAGCCCTCCGCCACTGCCTCCATATCGGCGTCGAAGCTCTCAAAGCCAAACTGCCTCCTCTCGACGTGGTTGAGCGCGTCGTTCGGGAGTTGGAGAACATTCCGCAGTTCAACGCGGGGAAGGGATCTGTGCTCACTTCCAAAGGCACCGTCGAAATGGAAGCTTCAATCATGGACGGCACCACTATGAATTGCGGAGCCGTTTCCGGCCTCACCACGGTTGTCAACGCCGTCTCTCTCGCTCGATTGGTCATGGAAAAGACGCCTCATATTTATCTCGCTTTCGATGGAGCAGAGGAATTTGCAAGACAACAAGGCGTTGAGACTCTCCATTCAAGCCATTTTATCACCGCAGAAAACATTGAAAGGCTAAAGCAGGCAATAGAAGCCAATAGGGTCCAGATTGACTATACCCAACCTATCGAAAACGATACTAAGAAAGAAACAGCAATTGCTAATGGTGATAGTCAAATTGGAACTGTTGGGTGTGTGGCTGTTGATGGTAATGGAAATTTAGCTTCTGCAACATCTACTGGTGGACTAGTGAACAAAATGGTTGGCCGAATTGGTGACACACCGGTCATAGGTGCTGGGACCTATGCTGATACACGTTGTGCGGTTTCGGCAACAGGCAAAGGTGAAGCAATAATACGAGGAACTGTGGCAAGAGATGTCGCTGCTCTGATGGAGTTTAAGGGTCTTTCTCTCGAGGAAGCTGCGACTTGTGTTGTGCATGAACGCACGCCAAAAGGCACTGTTGGTTTGGTTGCTGTGTCTGCCAAAGGAGAAGTTGCAATGCCTTTTAATACAACAGGCATGTTCAGAGCCTGTGCTACTGAAGATGGGTATTCTGAGATTTCAATTTGGCCTGCTGCCACCAAATTTGAGTGA 1032 0.4913 MEKIPFIKVIFSSEIMAEVDEEHVHTLHGGAGDIPLSLPPERRQPREEALRHCLHIGVEALKAKLPPLDVVERVVRELENIPQFNAGKGSVLTSKGTVEMEASIMDGTTMNCGAVSGLTTVVNAVSLARLVMEKTPHIYLAFDGAEEFARQQGVETLHSSHFITAENIERLKQAIEANRVQIDYTQPIENDTKKETAIANGDSQIGTVGCVAVDGNGNLASATSTGGLVNKMVGRIGDTPVIGAGTYADTRCAVSATGKGEAIIRGTVARDVAALMEFKGLSLEEAATCVVHERTPKGTVGLVAVSAKGEVAMPFNTTGMFRACATEDGYSEISIWPAATKFE 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00886 343 PANTHER L-ASPARAGINASE 26 323 IPR000246 GO:0016787
Vimu7g00886 343 Pfam Asparaginase 27 336 IPR000246 GO:0016787
Vimu7g00886 343 FunFam Isoaspartyl peptidase/L-asparaginase 207 338 - -
Vimu7g00886 343 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 42 337 IPR029055 -
Vimu7g00886 343 CDD Asparaginase_2 27 329 - -
Vimu7g00886 343 Gene3D (Glycosyl)asparaginase 207 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00886 Vimu-Chr7 8670632 8672513 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00886 68 314 Miscellaneous Gene Families AT4G00590 26.408 6.46e-17 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00886 K13051 - gmx:100799400 569.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00886 7 8670632 8672513 Vimu7g00886 7 8670632 8672513 ECH