Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00875 ATGCAGAGTTTAGTTCGCAGAGTGGTGGTGGAACAGAACCCCCATGGTCGCGCCAAATTTCACAGTATCTTCTACACATTCTCCTCTATTCTCAAACCTTCACAACCCCATTTGCATCAACGCAACCACATTCCCTCTTCCTTCCTCACTCACCAATCTCTTAACTTTCACTCATGTCGCTCATTTTCCTCCAAACTCCGCCCCTTTCTCTCCCGATCAATGATCTCGTGTTGCTTCGCCTTCAACTCTCTCCTCGGAGTCCGCGCCAGAAGCCTCTCACTAGATCACAGGTCAATTCTTCAGTATTTTCGTCGGGACAACTTCAATTTTAACCACAATAGTGAATTCTCCCGGCGTTCCTGGAGATCATGGCTCCGTGGGCTAACATCTAATGACGTGGTTTTGGGCTTGATTATAGCTAATGTTGGTATTTTTTTATTGTGGAGGATAGCAGATGAGAAGTTTATGATGAACAATTTTACCATCTCTTTGGACAATATTAAGAGTGGACGTTTGCACACTTTGATTACCAATGCATTTAGTCACGTTGATACCTGGCATATAGTTTCCAATATGGTTGGTCTCTACTTCTTTGGATTGAATGTTGGAAGAAATTTTGGACCTGAATTTCTGCTGAAGCTGTATCTTGCAGGGGCAGTTGTTGGCGCTGTTTTTTACTTAATACACCAGGCCTATAAAGCGCAAACATCAAAGGACTTGACAGCTATGATTGCGACAAGGGAATTAGCATTGGGCGCAAGTGGAGCTGTGAATGCTGTTATGCTACTTGACATATTTCTCTTTCCAAAGGCAACCCTCTATCTTGACTTCTTTATACCAGTTCCTGCGATCTTGCTGGGCATCTTTTTTATTGGGAGAGATATGCTCAGGATACTAGAGGGAGACAGTCAAGTATCAGGATCTGTTCATTTGGGGGGTGCTGTGGTTGCAGCCATAGCTTGGGCAGGTGTTCGGAGAGGAAGATTCTAA 990 0.4414 MQSLVRRVVVEQNPHGRAKFHSIFYTFSSILKPSQPHLHQRNHIPSSFLTHQSLNFHSCRSFSSKLRPFLSRSMISCCFAFNSLLGVRARSLSLDHRSILQYFRRDNFNFNHNSEFSRRSWRSWLRGLTSNDVVLGLIIANVGIFLLWRIADEKFMMNNFTISLDNIKSGRLHTLITNAFSHVDTWHIVSNMVGLYFFGLNVGRNFGPEFLLKLYLAGAVVGAVFYLIHQAYKAQTSKDLTAMIATRELALGASGAVNAVMLLDIFLFPKATLYLDFFIPVPAILLGIFFIGRDMLRILEGDSQVSGSVHLGGAVVAAIAWAGVRRGRF 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00875 329 FunFam RHOMBOID-like protein 12, mitochondrial 127 328 - -
Vimu7g00875 329 PANTHER RHOMBOID PROTEASE 32 324 - -
Vimu7g00875 329 Gene3D - 130 322 IPR035952 -
Vimu7g00875 329 Pfam Rhomboid family 167 324 IPR022764 GO:0004252|GO:0016020
Vimu7g00875 329 SUPERFAMILY Rhomboid-like 133 326 IPR035952 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00875 - - vra:106767388 613.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00875 7 8534318 8543290 Vimu7g00875 7 8534318 8543290 ECH