Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00863 ATGCCATTGTCTTCGTTTATTTTCTTCTCTTCAGATGTGTGTTTTTTCGCAGGTTTTGCTCCTTTTGTGTTTCTATTTCTTGTTATTGGGTGCACTGCAAGGCCTTTTTATCCTCTTCCCAACAAAGTCGATGGGGGAAGTAGGAAGCCCCTACAAACTTTTCGCCCATATAACATTGCACATCGCGGTTCAAATGGAGAGATTCCTGAAGAAACTTCTGCTGCATATACGAAAGCTATTGAAGAAGGTGCAGACTTCATTGAAGCTGATATCTTATCATCCAAAGACGGTGTTCTTATATGTTTCCATGATGTCTACCTTGATGATACTACTGACATTGCAAATCACAAGGAGTTTGCTGATCGTAAAAGAACGTATGAAGTCCAAGGGGAAAACATCACTGGGTTCTTCACTGGTAGAGTAGCTAAACTTGCTATACTTTTTGATTTCACATTGAAGGAGTTAAAGTCATTGAGGGTGAGACAGAGGTATAAATACAGGGATCAACAGTTTAATGGAAAGTTTCAAATCATCACTTTTGAAGAGTTCATTAACATAGCACTGGATGCACCCAGAGTTGTTGGAATATATCCAGAGATAAAAAATCCAGTATTTATCAATCAACATGTTAAATGGTCAGATGGCAAAAGATTTGAAGACAAGTTTGTGGAGACACTTCAGAAATATGGGTTAAAGGGTTCCTACCTGTCAAAAAATTGGCGGAGACAACCTGTATTCATTCAGTCATTTGCTCCAACTTCACTCGTGTATATAGCAAATAAGACGGACTTGCCCAAAATTTTCTTAATTGACGATGTTGATATTCCAACGCAGGACACCAATCAGTCATACTGGGAGATTACATCTGATGAATACTTAAACTACATAAAACAATATGTTGTGGGAATTGGACCATGGAAGGACACGTTAGTACCTGTGGTAAATAATTATATGGCAACTCCCACTGATATTGTCTCCAGGGCACATGCTCATAATCTGCAGGTGCATCCATATACTTACCGAAATGAAAACATTTTTTTGCACTTCAACTTTAGTCAAGATCCGTATTTGGAGTATGATTACTGGATCAACAAGATAGGTGTTGATGGTCTGTTTACAGACTTCACTGGTAGCCTCCATCGTTTTCAGGAATGGACCTCTAAACAGCAAGACGATGATGATGACGATGATGATGATGATGATGCATCCAAGTTATTGCATAAAATCGCATTGTTGCTCTCCTCTTATAATTGA 1254 0.386 MPLSSFIFFSSDVCFFAGFAPFVFLFLVIGCTARPFYPLPNKVDGGSRKPLQTFRPYNIAHRGSNGEIPEETSAAYTKAIEEGADFIEADILSSKDGVLICFHDVYLDDTTDIANHKEFADRKRTYEVQGENITGFFTGRVAKLAILFDFTLKELKSLRVRQRYKYRDQQFNGKFQIITFEEFINIALDAPRVVGIYPEIKNPVFINQHVKWSDGKRFEDKFVETLQKYGLKGSYLSKNWRRQPVFIQSFAPTSLVYIANKTDLPKIFLIDDVDIPTQDTNQSYWEITSDEYLNYIKQYVVGIGPWKDTLVPVVNNYMATPTDIVSRAHAHNLQVHPYTYRNENIFLHFNFSQDPYLEYDYWINKIGVDGLFTDFTGSLHRFQEWTSKQQDDDDDDDDDDDASKLLHKIALLLSSYN 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00863 417 Gene3D Phosphatidylinositol (PI) phosphodiesterase 54 382 IPR017946 GO:0006629|GO:0008081
Vimu7g00863 417 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 52 392 - -
Vimu7g00863 417 FunFam Glycerophosphodiester phosphodiesterase GDPD5 54 382 - -
Vimu7g00863 417 CDD GDPD_ScGlpQ1_like 56 376 - -
Vimu7g00863 417 Pfam Glycerophosphoryl diester phosphodiesterase family 61 377 IPR030395 GO:0006629|GO:0008081
Vimu7g00863 417 SUPERFAMILY PLC-like phosphodiesterases 56 381 IPR017946 GO:0006629|GO:0008081
Vimu7g00863 417 ProSiteProfiles GP-PDE domain profile. 56 383 IPR030395 GO:0006629|GO:0008081
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00863 21 416 Acyl Lipid Metabolism Gene Families AT1G74210 70.781 0.0 573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00863 K01126 - gmx:100778145 672.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00863 7 8462038 8465316 Vimu7g00863 7 8462038 8465316 ECH