Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00858 ATGGATTCGTGGGTTGTTGCTGCCATTGCTGGAGCTGGGTGTTTGGCTAGATATTTGAACAAGCTTTCAAAGAATGTCGATGGTTCATCTCCTCTGTCATTAGAGGATTCCTATTTTGTGAATGATGTGTCTCCAATCCAACCCTTCTGCACACAAGAAGGGAGAGATTCTTTATATAGAAGGGCCTCGGATGTGGATTCAGAGGATTGTCTTTTGGCTTCTGACGAAGGGCTTGAAAGTGAAAGAGTAAGGCTCTTCAAGAATTGCAGTGAGAGTGATGTCCTTTCTCTATCTAACTTTAATGATTATGGAAATGAGCAAGGCTCCAATGTTGTTGGCAATTGTGGTTTCCTACCCTATGATTTGTCTGCAGGAAAATTGGGCCATAATCCTCACGGAAATAGAATCTCTCACAGGACTAAGCGTCTGTATGGGCATATTAGTAGACCTTCAAACTCCTTAGAAAGTTGCCTAATGGCTCAGATATGCGAAGAGCAAGTCAAATTGGAAGAATCTGTGTTTTTGCCATCCGTGGCAACAAGGCCATTTCTTGTTGGTGATGGAAACCAAGTGATCCGAAGAGCAAATGATGTTGATTCTTTCAGTGGAATAACCGGAAGTGAAGAATACAGGTTGTATAGAAAAGGCAATAAGGTGAAGGATAAAAGTGTATTATTCGGAGTTCCTTCCTTGTCCAAGATTGGATCTTCTAATGATTCCAAGAAGATGAAGATTAATGCAGGCAATGGACGAAGTGTGAGACTGAGCCCTACTAGCAATGTGTTAAGTGGAAAGCACATCCATACTCAACATGATGCATCATTTCTCTTCAGCCTTGGGATTTCTTTTGGGATAATAACCTCCATGTTGGCAAATAAAAGAGAAATGGACAAGTTAAGAGAGTTGTTAAAGCAGACAGAAAACTTTGTTGAAGATCTACAAGAGGAACTTGAAATGAAAGATTCAATGAGAGTGAAAGAGTTACATAATGAAAATTCTGGTTCAGAGGGTACTTATGATCATTCCTTTTGTGATAAAGAGCTAAATGGATTTTCACCTGAAAAGCACATGGATAATTTCCCAATAACTGACTGCAAAGAATCATATGGTCAGAAGGAAGAAGAAAGTTCAGAAGCTATGAGCAAAATTGAAGCTGAGCTTGAAGCTGAGCTTGAGAGATTGGGATTAAACATGAATGAATCTAACCCAGAAAGAACGCTTTCTGAGCTTGTAGAGTGGATTGGTGAGTGGGCTGGTGAGTGGACTGGGGAGTTGACAGAGGGGCAGAAAGTGGGGCTCAACCCAGTGCTGCAGACCCACTACCTTGGGTTCCTGGAGAGAGAAAATTTGCCTCCACTTTGTGAGAAGGTGGAATTATGGTTAGTATTGCAGATCCATTACCTTGGGTGCCGGGAGAGAGAAAATTTGCCTCCACCTTGTGATATAAAGCATGTCTACAGAAAAAAATTCGAGACTTTGGTGTGGGACCCGGGCCTGGTGGAGAAAACTGACGGTGAATGGGATGGTGATCAGATGGAGGCGCAGGAAACTGAATTAGAAGCGGATTTTGCTCACGGTGAATTGCAAACTAACGTGATTGGTGGGAAAGATTTTTTCCATTCAAAACTAAATGAGGAAGATAGTGCCACTGTGGTTCCTGTAAATTATGCTGTTTCCCCTCATGAACTAACACTACGCTTACACGAAGTTATCCAATCCAGACTTGAGGGACGTGTACAGGAGCTTGAAATTGCCCTTGAAAATAGTCAGAGAAAACTGTGGTTTATGGAATCAGAGCACAAGAATAATTCCCAGAAATTTTTCCCAAGAAAAGCATCCTCCTTTAGTGAAGGAAATGTGTTGGCTTGGAATGAATGTGAGCCTATGACTGAACCCTTAGTTATGAATTTATCTGATGACCCTGCAGGTGCTTACAACGGCAGCTATTATGAAGAAATTATAAAGATAGATGACTTTGAAGAAAATTCTCCATCAAGCATGCATATTCCTGAATGCGAAGCAGCAAATGATCTGCTTACTTTTCCCATGGCTAATGAAGAGAGAGTTTCAAGGGAACTACTCTCTTCTGGTGAGGAAACAATGCTGGAAGGGCTAAGTTATAGCAATTATGAATCAAATGGTGTTACTAGAGATGAAAATTATGAGTGTGATTATGAGATGGAAAGACAATTAATAAGGCAAATTGTTGAAAAGACCAAGAAAGGTTCTCCTGTGTTCCAAAATGTTACAAGGATATTGTATTCTATGGATAAAGATGAGCATTAG 2286 0.4077 MDSWVVAAIAGAGCLARYLNKLSKNVDGSSPLSLEDSYFVNDVSPIQPFCTQEGRDSLYRRASDVDSEDCLLASDEGLESERVRLFKNCSESDVLSLSNFNDYGNEQGSNVVGNCGFLPYDLSAGKLGHNPHGNRISHRTKRLYGHISRPSNSLESCLMAQICEEQVKLEESVFLPSVATRPFLVGDGNQVIRRANDVDSFSGITGSEEYRLYRKGNKVKDKSVLFGVPSLSKIGSSNDSKKMKINAGNGRSVRLSPTSNVLSGKHIHTQHDASFLFSLGISFGIITSMLANKREMDKLRELLKQTENFVEDLQEELEMKDSMRVKELHNENSGSEGTYDHSFCDKELNGFSPEKHMDNFPITDCKESYGQKEEESSEAMSKIEAELEAELERLGLNMNESNPERTLSELVEWIGEWAGEWTGELTEGQKVGLNPVLQTHYLGFLERENLPPLCEKVELWLVLQIHYLGCRERENLPPPCDIKHVYRKKFETLVWDPGLVEKTDGEWDGDQMEAQETELEADFAHGELQTNVIGGKDFFHSKLNEEDSATVVPVNYAVSPHELTLRLHEVIQSRLEGRVQELEIALENSQRKLWFMESEHKNNSQKFFPRKASSFSEGNVLAWNECEPMTEPLVMNLSDDPAGAYNGSYYEEIIKIDDFEENSPSSMHIPECEAANDLLTFPMANEERVSRELLSSGEETMLEGLSYSNYESNGVTRDENYECDYEMERQLIRQIVEKTKKGSPVFQNVTRILYSMDKDEH 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00858 761 Coils Coil 572 599 - -
Vimu7g00858 761 PANTHER EMB|CAB62613.1 515 665 IPR040348 GO:0008356
Vimu7g00858 761 Coils Coil 373 393 - -
Vimu7g00858 761 Coils Coil 296 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00858 Vimu-Chr7 8427662 8437919 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00858 - - var:108335144 771.541
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00858 7 8427662 8437919 Vimu7g00858 7 8427662 8437919 ECH