Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00844 ATGGTGAAGATATGTGGAATTGGAGCTGGGTACGTGGGGGGTCCTACAATGGCTGTGATTGCCCTGAAATGTCCGTCGATTGAAGTGGCTGTGGTTGACATATCGGAGTCTCGGATATCAGCCTGGAATAGCAAGAAACTCCCTTTTTATGAGCCTGGCCTAGAAGAAGTGGTGAATCAGTGTAGAGGAAAGAATCTCCTCTTCAGCAGCGATGTGGAAAAGCACGTTTATGAAGCAGACATAATCTTTGTTTCAGTTAACACCCCCACAAAAATCAAAGGAATCGGAGCTGGTAAAGCTGCAGACTTAACTTATTGGGAAAGTGCGGCTAGGATGATAGCTGATGTTTCCAACTCTGATAAGATTGTTGTCGAGAAATCCACTGTCCCAGTGAGAACAGCTGAGGCAATTGGGAAAATCCTAAGTCAAAACAGTAAAAGCAAGGGAATCAAGTACCAAATTCTGTCAAATCCCGAGTTTCTCTCTGAGGGAACAGCTATTCAAGACCTTCTGAACCCTGACCGGGTTCTTATTGGAGGGAACCAAGACCCTCAAGGTTTAGATGCAATCCAAAAGTTGAAGGACATATACGCTTATTGGGTGCCTCAAGACAGAATCATAACAACAAATTTGTGGTCGGCAGAACTGTCAAAGTTAGCTGACAATGCCTTCTTAGCTCAAAGGATTTCATCTATCAATGCTATGTCTGCTTTATGTGAAGCCACAGGGGCCGAAGTCTCACAAGTTTCTCTTGCTCTCGGCAAAAACACCAAAATTGGGCCAAAGTTTCTGAATGCCAGTGTTGGTTTTGGTGGTTCTTGCTTTCAAAAGGACATACTGAACTTGGTGTACATATGTGAGAGCAATGGTCTCAGCGAAGTGGGAAATTACTGGAAAGAAGTGATCAAGGTGAATGAGTACCAAAAGAGTAGGTTTGTGCACAGGGTTGTGACTTCAATGTTCAACACAGTTTCTGGTAAGAAGATTGCAATTCTGGGGTTTGCCTTCAAGAAGGACACAAGTGACACAAGGAAAAGTCCTGCAATTGATGTTTGCAAAGGTCTTTTGGGAGATAATGCGTGTTTGAGTATCTATGATCCACGCGTTACTGAGAATCAGATTGAAAAGGAGCTGTTTATGGATGGTGTTGAATGGGAGCAGCCAATGGTTAATGTTGTTGGAGATGCTTATGAGGCAACTAGAGATGCTCACGGACTATGCATTCTTACAGAGTGGGATGAGTTCAAGACAATTGACTATCAAAGAGTGTACCAGAACATGGAGAAACCAGCGTTTGTGTTTGATGGTAGAAACATCTTGGATGTTCACAACTTAAGGGAAATTGGATTCATTGTTTACTCAATTGGGAAGCCTTTAGACCAATGGCTCATGAACATCAACATCATGAATTGA 1413 0.4289 MVKICGIGAGYVGGPTMAVIALKCPSIEVAVVDISESRISAWNSKKLPFYEPGLEEVVNQCRGKNLLFSSDVEKHVYEADIIFVSVNTPTKIKGIGAGKAADLTYWESAARMIADVSNSDKIVVEKSTVPVRTAEAIGKILSQNSKSKGIKYQILSNPEFLSEGTAIQDLLNPDRVLIGGNQDPQGLDAIQKLKDIYAYWVPQDRIITTNLWSAELSKLADNAFLAQRISSINAMSALCEATGAEVSQVSLALGKNTKIGPKFLNASVGFGGSCFQKDILNLVYICESNGLSEVGNYWKEVIKVNEYQKSRFVHRVVTSMFNTVSGKKIAILGFAFKKDTSDTRKSPAIDVCKGLLGDNACLSIYDPRVTENQIEKELFMDGVEWEQPMVNVVGDAYEATRDAHGLCILTEWDEFKTIDYQRVYQNMEKPAFVFDGRNILDVHNLREIGFIVYSIGKPLDQWLMNINIMN 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00844 470 Gene3D - 1 210 - -
Vimu7g00844 470 PIRSF UDPglc_DH_euk 1 469 IPR028356 GO:0003979
Vimu7g00844 470 SMART UDPG_MGDP_dh_C_a_2_a 330 442 IPR014027 GO:0016616|GO:0051287
Vimu7g00844 470 Pfam UDP-glucose/GDP-mannose dehydrogenase family, central domain 212 306 IPR014026 GO:0016616|GO:0051287
Vimu7g00844 470 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 204 IPR036291 -
Vimu7g00844 470 FunFam UDP-glucose 6-dehydrogenase 1 210 - -
Vimu7g00844 470 PIRSF UDPglc_GDPman_dh 2 457 IPR017476 GO:0016616
Vimu7g00844 470 Gene3D - 243 468 - -
Vimu7g00844 470 PANTHER UDP-GLUCOSE DEHYDROGENASE/UDP-MANNAC DEHYDROGENASE 1 461 IPR028356 GO:0003979
Vimu7g00844 470 FunFam UDP-glucose 6-dehydrogenase 243 461 - -
Vimu7g00844 470 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 212 311 IPR008927 -
Vimu7g00844 470 NCBIfam nucleotide sugar dehydrogenase 3 438 IPR017476 GO:0016616
Vimu7g00844 470 Gene3D - 211 242 - -
Vimu7g00844 470 Pfam UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 330 441 IPR014027 GO:0016616|GO:0051287
Vimu7g00844 470 FunFam UDP-glucose 6-dehydrogenase 211 242 - -
Vimu7g00844 470 Pfam UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 3 186 IPR001732 GO:0016616|GO:0051287
Vimu7g00844 470 SUPERFAMILY UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 317 453 IPR036220 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00844 Vimu-Chr7 8306457 8307869 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00844 K00012 - gmx:100781197 823.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00844 7 8306457 8307869 Vimu7g00844 7 8306457 8307869 ECH