Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00832 ATGTTGTCTATAAATTGGACATGCACGCAACTCTATTGGATCAACCAAACAAACAAACAAAAGCCTTTTTCTTACAAAAAAATGGAGTACTCTAATGGATTTCCTAGAAAAAGAGATGTTTCTCTTCAGGAACTTAGCAAAAGGCTTGCTGAGTTTGCTCAAGTAAGAGGATGGGAACAATATCACAGTCCCAGAAACCTTCTTTTAGCTCTTGTTGGAGAGGTGGGAGAGCTTTCTGAGATATTCCAGTGGAAAGGAGAGGTTGCAAAGGGGTTACCCAATTGGAGTAGTGATGATAAGGAGCACTTAGAGGAAGAGCTTTCTGATGTTTTGCTTTATCTAGTGCGTCTTGCAGATGTTTGTGGGCTAGATCTTGGACAAGCAGCTCTCACAAAAATTGTCAAGAATGCTAAGAAATACCCAGTTACTACTACTGACCATACCACCACTTCCAATCGCAACTAG 465 0.4065 MLSINWTCTQLYWINQTNKQKPFSYKKMEYSNGFPRKRDVSLQELSKRLAEFAQVRGWEQYHSPRNLLLALVGEVGELSEIFQWKGEVAKGLPNWSSDDKEHLEEELSDVLLYLVRLADVCGLDLGQAALTKIVKNAKKYPVTTTDHTTTSNRN 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00832 154 PANTHER - 17 149 - -
Vimu7g00832 154 Pfam MazG-like family 74 148 IPR025984 GO:0009143|GO:0047429
Vimu7g00832 154 CDD NTP-PPase_RS21-C6_like 47 136 IPR025984 GO:0009143|GO:0047429
Vimu7g00832 154 SUPERFAMILY all-alpha NTP pyrophosphatases 40 144 - -
Vimu7g00832 154 Gene3D - 34 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00832 Vimu-Chr7 8222971 8224097 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00832 K16904 - gmx:100500294 223.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00832 7 8222971 8224097 Vimu7g00832 7 8222971 8224097 ECH