Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00828 ATGGGTAGTGAGATAGATACTAAATCAATTGAACCTGTCCGGAATGCTGTCTCTTTGTTTGGAGATAAAGGTGATCAGAAGAAATATCAAGCTGCAAGGAGTAAGAGTGATTGTGGAAATGAATTTGAGGAGCTGACAAAGGAATTGGCCAACTGCAAGTTTCAGTTAGAAGCAAAGCATGCTGCACACATGCAAGCACTTCTTAAGTTGGAGCATAGCCAAAAGATGATTCACGAATTGTCTACCCTACTGAAGAAATCTGACATTGAAAGAAACAAGAACATGAGTGAATGTTCAGAATGTAAATCTCGCAAAGGTGAACTTGAATCCAAGATGAAAGAGATGGTTGATCAGAGTTTGGAGGCTGCGAAGGTCCGAGACCAGTTTGCGCATGTTTTAAGCGAACTTAAGGCCACACAAAGGGAGCTTCTTAACAAAGAAACAGAACTTGTTGCTGCTAGAGATTCAGAAATGAACTCCTTGACCAAAGCAAAACAATTGGAATCCGCTTTGGAGGCTGAAAAGGAACAGAAAGAAGAACTTGTGCAGCAAGTGAAGGAGCTCAATGAAGTTATTCACAATTCAAAACTAGCTGCCATTGAATCTGAGAGAGAGAAGTTAGCTTTATTGTCTGAGAAGGATGAGCAAATTGATTTCGCTACAAAAGCTACTGCTCAGGTACAACAACAGCTAGAAGATATGAGAAAGCATGCGGAAATGTTACAAAATCAACCAATGGGCGTGTCTACAGTGGTGGATTCTCTTCTCCTGGAACATATACTAGCTAATGGAAAACTCGTTTTATCTGAGGATTCTGCTCCCAAAGACTTAGACCGATTAAACATTGACATGGAACTAAAGGAGAGAAAGATAATGGATCAATCTGTGTACATTCACACACTAGAAATGGAATTGAGTCGGTTAAAGCAAGAAGTTAAGGTTGCAAAGGTAGAAATAAATGCCTTGAGTATTACTAACGAATCACTCACTAGTGAGTTACATGAGGCTAAAGCAGAACTAAACATGAAAAAGGGGAGCGACATTGAAACACAGGTGGAAATTGCATTGCTGAAGTCTAAGCTGCAGGAACATATGGTGGTTTACAAGAATGGAAAGATCAGTGAAGATTCTACAACCGATCACTCAAAGGCAGAAGCTGAAGAGAGAAATAGTGAGAAGAACAATGAGCATGTGACAGGAAAATCCTTATTTGGAGTTGAAGGAGAGGTAGGAAGGTTTTCAGAGTTAGCATTGATGAAAAAGGAGCTGGAAAATGCATCAGTGAAAATTTCTGAGTTGAGGGCTCGTGCAGAACAGGCTCTAAGCAGGGCTGAGTTTGCTGAGAATGCTAAAACTGCATTAGAGGAGAAAATAAAGAGACATAGGGAACATAGGCAGAGAAGAAGGCTTGCTCTTACTGCCCTTAGGGAGGAATCTAGCCCTAAACCATTTAGTCCTTCCTCATCGCCTGGATCCTATCAGCCCTTAGGTAAGCTAAGGAAACTCTTGTCTGTGGTGTTGGTACATTGCTACTACGGTGACAGAGGAATAGCTGACTCATCCTTGGTGCGTCTAAGGAGTATTCGAAGGAGGTGTTTCATCCTTCGTGAAGTATTCGGAGGAGGTGTCTCATCCTTTGTGAAGATTCAAAGGAGGTGCAGGTTCATCTCTTGTGGTATCAAGAGAGGTGGTTTCTAA 1698 0.4146 MGSEIDTKSIEPVRNAVSLFGDKGDQKKYQAARSKSDCGNEFEELTKELANCKFQLEAKHAAHMQALLKLEHSQKMIHELSTLLKKSDIERNKNMSECSECKSRKGELESKMKEMVDQSLEAAKVRDQFAHVLSELKATQRELLNKETELVAARDSEMNSLTKAKQLESALEAEKEQKEELVQQVKELNEVIHNSKLAAIESEREKLALLSEKDEQIDFATKATAQVQQQLEDMRKHAEMLQNQPMGVSTVVDSLLLEHILANGKLVLSEDSAPKDLDRLNIDMELKERKIMDQSVYIHTLEMELSRLKQEVKVAKVEINALSITNESLTSELHEAKAELNMKKGSDIETQVEIALLKSKLQEHMVVYKNGKISEDSTTDHSKAEAEERNSEKNNEHVTGKSLFGVEGEVGRFSELALMKKELENASVKISELRARAEQALSRAEFAENAKTALEEKIKRHREHRQRRRLALTALREESSPKPFSPSSSPGSYQPLGKLRKLLSVVLVHCYYGDRGIADSSLVRLRSIRRRCFILREVFGGGVSSFVKIQRRCRFISCGIKRGGF 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00828 565 MobiDBLite consensus disorder prediction 372 400 - -
Vimu7g00828 565 MobiDBLite consensus disorder prediction 374 396 - -
Vimu7g00828 565 Coils Coil 224 244 - -
Vimu7g00828 565 Coils Coil 416 467 - -
Vimu7g00828 565 Coils Coil 136 156 - -
Vimu7g00828 565 Pfam Weak chloroplast movement under blue light 5 363 IPR008545 -
Vimu7g00828 565 Coils Coil 298 346 - -
Vimu7g00828 565 Coils Coil 161 198 - -
Vimu7g00828 565 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 4 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00828 Vimu-Chr7 8180317 8183636 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00828 - - gmx:102665346 633.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00828 7 8180317 8183636 Vimu7g00828 7 8180317 8183636 ECH