Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00827 ATGAATAAGGCTCTCACTAAACTGGGAAGTGCTTGGATCTCCAAGAAAGCCAAGGCAGAGATTTCCCACATAACTGACGATCTATCAGCTCTCTCAAATACTGTGGAAGAGAAGACAAAACTTTTCATCAACAAGCTGAAAGGAAAATCCCAGAAGGCTTTACCAGATCTTCTTCGAGAGTACAACCTTCCTCCTGGTCTGTTTCCCCGGAACATAACTTGCTATGAGTTTGATGTATCTAAAGGAAAGTTGGTGGTGCATTTGTGCTCTCCCTGTGAGGTGTGCTTCAAGGATTCATCCATTGTGAGATATGCAAACCGTGTGAAAGGGAGCTTAACAAAGGGTAAGTTGAATGTTTTAGATGGAATGAAGACCAAGGTTCTTGTGTGGGTTAAGGTCACCAGTGTTGCTGTTGAGAGCTACAAATCTGACAAAGTGTGGTTCACTACTGCTGGAGTTAAGAAATCAAGGCCCAAAGATGCCTATGAAATGCCTCGTGAAGCTGTTAAGGTAGAAGAATTTTGA 525 0.4267 MNKALTKLGSAWISKKAKAEISHITDDLSALSNTVEEKTKLFINKLKGKSQKALPDLLREYNLPPGLFPRNITCYEFDVSKGKLVVHLCSPCEVCFKDSSIVRYANRVKGSLTKGKLNVLDGMKTKVLVWVKVTSVAVESYKSDKVWFTTAGVKKSRPKDAYEMPREAVKVEEF 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00827 174 Gene3D - 32 174 IPR036758 -
Vimu7g00827 174 SUPERFAMILY At5g01610-like 4 173 IPR036758 -
Vimu7g00827 174 Pfam Protein of unknown function, DUF538 56 163 IPR007493 -
Vimu7g00827 174 PANTHER T31J12.3 PROTEIN-RELATED 40 166 IPR007493 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00827 Vimu-Chr7 8175906 8177241 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00827 - - gmx:100776470 320.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00827 7 8175906 8177241 Vimu7g00827 7 8175906 8177241 ECH