Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00816 ATGGGGCAAGACAATCACCACAAGCGCAGCACCAGCGCCGGTTTACCCACCTCCCACGCCCGAGGCCGCGCCATCGGGATCCCCCGCGGCCGCCAGATCCAGAAGACCTTCAACAACATCAAGATCACTATACTATGCGGCTTTGTGACCATCCTCGTCCTCCGCGGCACCATCGGCGTCAATCTCGGCTCCTCCGATTCCGACGCCGTCAACCAGAACCTTATCGAGGAGACCAACCGCATCCTCGCCGAGATCCGATCCGACGCCGACCCCTCCGATCCCGACGACCAGCAACCCTTCAACCCCAACGCTACCTTCACCCTCGGCCCCAAAATCAATAATTGGGACCAAGAGCGCCAAAATTGGCTCACTCAAAACCCCGAATACCCTAATTTCATCAGAGGTAAACCTCGCATCTTGCTCCTCACTGGTTCCCCTCCCAAACCCTGTGATAACCCTATTGGAGATCATTACCTCTTGAAGTCCATTAAGAACAAGATTGATTACTGTAGATTACACGGGATTGAAATTGTGTACAATTTGGCTCATTTGGATGTGGAACTTGCTGGCTACTGGGCAAAGTTGCCTATGATTCGGAGGTTGATGTTGTCACATCCCGAGGTTGAGTGGATTTGGTGGATGGATAGTGATGCTTTTTTTACTGATATGGTGTTTGAGCTTCCCATGTCTAAGTACGATGCTTATAATTTGGTTCTTCATGGATACCCTGATTTGTTGTTCGACCAGAAGTCTTGGATTGCGGTGAATACTGGGAGTTTTCTGTTTAGGAACTGCCAGTGGTCTTTGGATTTGCTTGATGAATGGGCTCCCATGGGTCCCAAGGGGCCGGTTCGCGAGGAGGCCGGCAAGATCTTGACGGCCAATCTCAAGGGGAGGCCGGCATTTGAGGCCGACGATCAGTCTGCATTGATATACTTGCTGCTGTCCAAGAAGGAGAAGTGGATGGATAAGGTGTTTCTTGAGAATTCGTTCTATTTGCACGGTTACTGGGCAGGGTTGGTTGATCGGTATGAGGAGATGATTGAGAAGTATCACCCCGGGTTGGGGGATGAGAGATGGCCGTTTGTGACACATTTTGTCGGCTGTAAGCCCTGTGGGAGCTATGGAGATTATCCTGTGGAGAGGTGCCTCAGTAGCATGGAGAGGGCTTACAATTTTGCTGATAATCAGGTGCTTAAGCTCTATGGTTTCAGGCATCGTGGTCTGTTGAGCCCCAAGATCAAGAGGATCAGAAATGAGACTGTTACTCCTTTGGAGTTTGTAGACCAGTTTGATATTCGAAGGCATTCTACGGAAAGCAAGGGATTGAAGAGCTAG 1338 0.5052 MGQDNHHKRSTSAGLPTSHARGRAIGIPRGRQIQKTFNNIKITILCGFVTILVLRGTIGVNLGSSDSDAVNQNLIEETNRILAEIRSDADPSDPDDQQPFNPNATFTLGPKINNWDQERQNWLTQNPEYPNFIRGKPRILLLTGSPPKPCDNPIGDHYLLKSIKNKIDYCRLHGIEIVYNLAHLDVELAGYWAKLPMIRRLMLSHPEVEWIWWMDSDAFFTDMVFELPMSKYDAYNLVLHGYPDLLFDQKSWIAVNTGSFLFRNCQWSLDLLDEWAPMGPKGPVREEAGKILTANLKGRPAFEADDQSALIYLLLSKKEKWMDKVFLENSFYLHGYWAGLVDRYEEMIEKYHPGLGDERWPFVTHFVGCKPCGSYGDYPVERCLSSMERAYNFADNQVLKLYGFRHRGLLSPKIKRIRNETVTPLEFVDQFDIRRHSTESKGLKS 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00816 445 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 136 283 IPR029044 -
Vimu7g00816 445 FunFam xyloglucan 6-xylosyltransferase 2 135 286 - -
Vimu7g00816 445 Pfam galactosyl transferase GMA12/MNN10 family 136 374 IPR008630 GO:0016020|GO:0016757
Vimu7g00816 445 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 5-RELATED-RELATED 23 430 IPR008630 GO:0016020|GO:0016757
Vimu7g00816 445 MobiDBLite consensus disorder prediction 1 17 - -
Vimu7g00816 445 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00816 Vimu-Chr7 8080087 8081424 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00816 10 437 Glycosyltransferase AT5G07720 80.000 0.0 746
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00816 K08238 - gmx:100819400 856.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00816 7 8080087 8081424 Vimu7g00816 7 8080087 8081424 ECH