Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00812 ATGGGTTCTACCGCTGAAGACCGATCAGAGATTGTGTTCTTCGATGTGGAGACCAGCGTCCCCACTCGAACAGGTCAGGGATTTGCCATTCTCGAATTCGGAGCCATTTTGGTTTGCCCCAAGACGCTCACGGAGCTCCGCAACTACTCCACCCTCGTCCGACCCCCCGTTCTCTCCGTCATCTCCCCCTTGTCCCAGCGCTGCAATGGCATCACCGCCGACGCCGTCGCCGCCGCGCCGACTTTTGCCGACATTGCTCACCTCGTCTACGACCTTCTTCACGGGAGGATTTGGGCGGGTCATAATATCATAAGGTTTGACTGTGTTCGTATTAGAGATGCTTTTGCTGAGATTAATCAGCCGCCACCTGAACCTAAGGGAACCATTGACTCTCTAGTTTTGTTGACTCAGAAGTTTGGAAGAAGAGCTGGTGACATGAAGATGGCTACTCTTGCTACTTATTTTGGACTTGGACGCCAGACACATAGGAGCTTAGATGATGTTCGGATGAATCTTGAAGTCCTCAAGTACTGTGCAACTGTTCTATTCTTGGAGTCAAGTCTCCCGGATATATTCACTGCAAACAGTTGGGTTTCACCAAAGACTACGACAAGAAGCCGCAGTAATGGGAAATCTCCATCACAGGGGGGCTTATTAAACATTAATGGGGTTTCTGTATCATCATCTCCTGCTGTTGAATCCAAAGACAAAAGTCATCCTATAATTTCTTTAGCAATGAGCGGCCCAGAAGGGGATGCCCTTAATAATGCAGATCCTAATATAGTTCAATCGGATCCTTATAATTTTAGTACTCTGGAGGAAGAAATAAATAGAGCACCCATTAAGTCAGATGTTTCCATGGTGGAAAAAACCATGCAAGAGTCACCTGATTTGGCTTCCTCGTCTTCTGTGTTTCAGCCTTGCAGCAGCTCTATTCTTGTTTTAGAACCTGATAGAATATGTGTCCCTTCTATTGATGCATCTCTTGTTCCATCTTTTCAAGGCAGTCAAAGGATAGAATTACTGCATGAAGGTTTTCCATTCCAACTTTATTGTACTGATTTGAAAGTGCGGTTTGGAATAAGCACGAAATTTGTTGATAATGCTGGCCGGCCACGATTGAGTTTTGTGGTTGATTCATCACCAAGTCTATGTAATGTTCTTGATGCATGTGACGACGTTGCTAAGAAGTTAACGGTGGATTCTGGCAGCAGCTCTGATTGGAGGCCTGTTGTCATTAGGAAAGAAGGTTTCTTCAACTATCCTACTTTCAACATGACCACCGTGTCAGATGGGGTCTGTGTCCATTTTCCTGGTTTTTTAAAATCATTAGATTATGCTTTTATTATTTTTGTGCTGAGAGTGAACCCTGGCGCAATTGTAAGGTTACAGCGTTGTAACCTGGAGACTGGGGTCATGGGTTCAAACCTTGGAAACAACTTCCCTGCTTGCCAGGGTAAGCCTTATGAACTGGGCATACCTACAGCTGTAGTCGCAGACGTTGCCATTTATGCCACAGAAATATATCAGAAAGAGTCTTCGGGAGCAGTGCAAAGACTTCTCTTCAGTAAGTTTGATGCTGCAGAACTTGGTTCCTTGTTCATGCCTGGGACATTTGTTGATGCCTTCTTCTCGTTAGATCCCTATGACTATCAGCAGAATGCAGGGATTAAATTAGTTGCTAAAAAATTGATTATTCATTGCAAATAG 1710 0.4474 MGSTAEDRSEIVFFDVETSVPTRTGQGFAILEFGAILVCPKTLTELRNYSTLVRPPVLSVISPLSQRCNGITADAVAAAPTFADIAHLVYDLLHGRIWAGHNIIRFDCVRIRDAFAEINQPPPEPKGTIDSLVLLTQKFGRRAGDMKMATLATYFGLGRQTHRSLDDVRMNLEVLKYCATVLFLESSLPDIFTANSWVSPKTTTRSRSNGKSPSQGGLLNINGVSVSSSPAVESKDKSHPIISLAMSGPEGDALNNADPNIVQSDPYNFSTLEEEINRAPIKSDVSMVEKTMQESPDLASSSSVFQPCSSSILVLEPDRICVPSIDASLVPSFQGSQRIELLHEGFPFQLYCTDLKVRFGISTKFVDNAGRPRLSFVVDSSPSLCNVLDACDDVAKKLTVDSGSSSDWRPVVIRKEGFFNYPTFNMTTVSDGVCVHFPGFLKSLDYAFIIFVLRVNPGAIVRLQRCNLETGVMGSNLGNNFPACQGKPYELGIPTAVVADVAIYATEIYQKESSGAVQRLLFSKFDAAELGSLFMPGTFVDAFFSLDPYDYQQNAGIKLVAKKLIIHCK 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00812 569 SUPERFAMILY Ribonuclease H-like 10 180 IPR012337 -
Vimu7g00812 569 Gene3D - 4 182 IPR036397 GO:0003676
Vimu7g00812 569 MobiDBLite consensus disorder prediction 200 221 - -
Vimu7g00812 569 PANTHER DNA POLYMERASE III SUBUNIT EPSILON 8 558 - -
Vimu7g00812 569 FunFam Exonuclease family protein 4 182 - -
Vimu7g00812 569 Pfam Exonuclease 12 175 IPR013520 -
Vimu7g00812 569 CDD DEDDh 12 176 - -
Vimu7g00812 569 SMART exoiiiendus 10 184 IPR013520 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00812 Vimu-Chr7 8050046 8053474 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00812 - - ccaj:109808157 718.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00812 7 8050046 8053474 Vimu7g00812 7 8050046 8053474 ECH